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  5. Seita.6G170500.1

Seita.6G170500.1


Description : NADPH-oxidase *(Rboh)


Gene families : OG_42_0000215 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000215_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.6G170500.1
Cluster HCAA Clusters: Cluster_218

Target Alias Description ECC score Gene Family Method Actions
At5g07390 No alias Respiratory burst oxidase homolog protein A... 0.04 Orthogroups_2024-Update
Glyma.05G021100 No alias respiratory burst oxidase protein F 0.03 Orthogroups_2024-Update
Kfl00600_0020 kfl00600_0020_v1.1 (at4g25090 : 239.0) Riboflavin synthase-like superfamily... 0.02 Orthogroups_2024-Update
LOC_Os09g26660 No alias ferric reductase, putative, expressed 0.02 Orthogroups_2024-Update
MA_10429792g0020 No alias (at1g64060 : 456.0) Interacts with AtrbohD gene to fine... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEA 16Dec
MF GO:0016491 oxidoreductase activity IEA 16Dec
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0006364 rRNA processing IEP Predicted GO
MF GO:0008168 methyltransferase activity IEP Predicted GO
MF GO:0008171 O-methyltransferase activity IEP Predicted GO
MF GO:0008173 RNA methyltransferase activity IEP Predicted GO
MF GO:0008649 rRNA methyltransferase activity IEP Predicted GO
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Predicted GO
BP GO:0016072 rRNA metabolic process IEP Predicted GO
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Predicted GO
BP GO:0034470 ncRNA processing IEP Predicted GO
MF GO:0140102 catalytic activity, acting on a rRNA IEP Predicted GO
InterPro domains Description Start Stop
IPR013130 Fe3_Rdtase_TM_dom 473 646
IPR013623 NADPH_Ox 189 293
IPR013121 Fe_red_NAD-bd_6 810 991
IPR013112 FAD-bd_8 689 803
No external refs found!