1. Home
  2. Species
  3. Setaria italica
  4. Sequence
  5. Seita.6G177900.1

Seita.6G177900.1


Description : clathrin assembly protein *(PICALM9)


Gene families : OG_42_0004463 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004463_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.6G177900.1
Cluster HCAA Clusters: Cluster_279

Target Alias Description ECC score Gene Family Method Actions
GRMZM2G084885 No alias ENTH/VHS/GAT family protein 0.03 Orthogroups_2024-Update
LOC_Os08g36410 No alias ANTH domain containing protein, expressed 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005543 phospholipid binding IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Predicted GO
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Predicted GO
MF GO:0005375 copper ion transmembrane transporter activity IEP Predicted GO
CC GO:0005811 lipid droplet IEP Predicted GO
BP GO:0006825 copper ion transport IEP Predicted GO
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Predicted GO
CC GO:0012511 monolayer-surrounded lipid storage body IEP Predicted GO
MF GO:0019104 DNA N-glycosylase activity IEP Predicted GO
BP GO:0035434 copper ion transmembrane transport IEP Predicted GO
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Predicted GO
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Predicted GO
InterPro domains Description Start Stop
IPR011417 ANTH_dom 45 239
IPR011417 ANTH_dom 260 319
No external refs found!