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  5. Seita.6G180600.1

Seita.6G180600.1


Description : Unknown function


Gene families : OG_42_0013464 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0013464_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.6G180600.1
Cluster HCAA Clusters: Cluster_191


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP Predicted GO
MF GO:0000166 nucleotide binding IEP Predicted GO
MF GO:0004222 metalloendopeptidase activity IEP Predicted GO
MF GO:0004386 helicase activity IEP Predicted GO
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
CC GO:0005730 nucleolus IEP Predicted GO
BP GO:0006457 protein folding IEP Predicted GO
BP GO:0006508 proteolysis IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
MF GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity IEP Predicted GO
BP GO:0015780 nucleotide-sugar transmembrane transport IEP Predicted GO
BP GO:0015931 nucleobase-containing compound transport IEP Predicted GO
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Predicted GO
MF GO:0016462 pyrophosphatase activity IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Predicted GO
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
MF GO:0017111 nucleoside-triphosphatase activity IEP Predicted GO
MF GO:0030515 snoRNA binding IEP Predicted GO
CC GO:0031090 organelle membrane IEP Predicted GO
MF GO:0031625 ubiquitin protein ligase binding IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0034511 U3 snoRNA binding IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
MF GO:0043015 gamma-tubulin binding IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
MF GO:0044389 ubiquitin-like protein ligase binding IEP Predicted GO
CC GO:0044431 Golgi apparatus part IEP Predicted GO
BP GO:0071702 organic substance transport IEP Predicted GO
BP GO:0071705 nitrogen compound transport IEP Predicted GO
BP GO:0090481 pyrimidine nucleotide-sugar transmembrane transport IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
CC GO:0098588 bounding membrane of organelle IEP Predicted GO
BP GO:1901264 carbohydrate derivative transport IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 215 263
IPR002885 Pentatricopeptide_repeat 424 469
IPR002885 Pentatricopeptide_repeat 319 367
IPR002885 Pentatricopeptide_repeat 144 193
IPR002885 Pentatricopeptide_repeat 76 122
IPR002885 Pentatricopeptide_repeat 386 417
IPR002885 Pentatricopeptide_repeat 280 312
IPR002885 Pentatricopeptide_repeat 584 611
IPR002885 Pentatricopeptide_repeat 43 72
IPR002885 Pentatricopeptide_repeat 619 647
IPR002885 Pentatricopeptide_repeat 514 542
IPR002885 Pentatricopeptide_repeat 8 36
IPR002885 Pentatricopeptide_repeat 549 577
No external refs found!