1. Home
  2. Species
  3. Setaria italica
  4. Sequence
  5. Seita.6G182500.1

Seita.6G182500.1


Description : Unknown function


Gene families : OG_42_0000013 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000013_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.6G182500.1
Cluster HCAA Clusters: Cluster_82

Target Alias Description ECC score Gene Family Method Actions
419355 No alias carboxyesterase 17 0.02 Orthogroups_2024-Update
Brara.B03796.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.E00516.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.G01992.1 No alias gibberellin receptor *(GID1) 0.03 Orthogroups_2024-Update
Brara.J01908.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Glyma.01G239600 No alias alpha/beta-Hydrolases superfamily protein 0.03 Orthogroups_2024-Update
Glyma.06G308500 No alias alpha/beta-Hydrolases superfamily protein 0.03 Orthogroups_2024-Update
Glyma.16G208200 No alias carboxyesterase 18 0.02 Orthogroups_2024-Update
HORVU4Hr1G062060.1 No alias Unknown function 0.04 Orthogroups_2024-Update
HORVU5Hr1G098770.1 No alias Unknown function 0.07 Orthogroups_2024-Update
MA_3180g0010 No alias (at2g45600 : 251.0) alpha/beta-Hydrolases superfamily... 0.02 Orthogroups_2024-Update
Potri.006G198800 No alias alpha/beta-Hydrolases superfamily protein 0.02 Orthogroups_2024-Update
Potri.018G028300 No alias alpha/beta-Hydrolases superfamily protein 0.02 Orthogroups_2024-Update
Pp1s37_32V6 No alias gibberellin receptor 0.01 Orthogroups_2024-Update
Seita.2G233400.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.5G109700.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.002G227800.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.002G395200.2 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.007G041701.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sopen01g050750 No alias alpha/beta hydrolase fold 0.03 Orthogroups_2024-Update
Sopen05g005420 No alias alpha/beta hydrolase fold 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016787 hydrolase activity IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Predicted GO
BP GO:0006281 DNA repair IEP Predicted GO
BP GO:0006284 base-excision repair IEP Predicted GO
BP GO:0006974 cellular response to DNA damage stimulus IEP Predicted GO
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Predicted GO
BP GO:0010215 cellulose microfibril organization IEP Predicted GO
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Predicted GO
MF GO:0019104 DNA N-glycosylase activity IEP Predicted GO
BP GO:0030198 extracellular matrix organization IEP Predicted GO
BP GO:0033554 cellular response to stress IEP Predicted GO
BP GO:0043062 extracellular structure organization IEP Predicted GO
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Predicted GO
BP GO:0051716 cellular response to stimulus IEP Predicted GO
MF GO:0140097 catalytic activity, acting on DNA IEP Predicted GO
InterPro domains Description Start Stop
IPR013094 AB_hydrolase_3 76 307
No external refs found!