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  5. Seita.6G185800.1

Seita.6G185800.1


Description : regulatory protein *(CYCD) of cell cycle


Gene families : OG_42_0000136 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000136_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.6G185800.1
Cluster HCAA Clusters: Cluster_65

Target Alias Description ECC score Gene Family Method Actions
Bradi1g21230 No alias CYCLIN D4;1 0.04 Orthogroups_2024-Update
Brara.A02151.1 No alias regulatory protein *(CYCD) of cell cycle 0.03 Orthogroups_2024-Update
GRMZM2G476685 No alias CYCLIN D1;1 0.03 Orthogroups_2024-Update
Glyma.12G199300 No alias Cyclin D6;1 0.02 Orthogroups_2024-Update
MA_172842g0010 No alias (at3g50070 : 166.0) Encode CYCD3;3, a CYCD3 D-type... 0.03 Orthogroups_2024-Update
MA_93221g0010 No alias (at1g70210 : 231.0) Encodes a D-type cyclin that... 0.03 Orthogroups_2024-Update
Potri.008G146600 No alias CYCLIN D1;1 0.03 Orthogroups_2024-Update
Seita.8G251100.1 No alias regulatory protein *(CYCD) of cell cycle 0.03 Orthogroups_2024-Update
Sobic.001G464800.1 No alias regulatory protein *(CYCD) of cell cycle 0.06 Orthogroups_2024-Update
Sobic.002G190700.2 No alias regulatory protein *(CYCD) of cell cycle 0.02 Orthogroups_2024-Update
Solyc02g064900 No alias cyclinD3_6 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Predicted GO
BP GO:0006281 DNA repair IEP Predicted GO
BP GO:0006284 base-excision repair IEP Predicted GO
BP GO:0006974 cellular response to DNA damage stimulus IEP Predicted GO
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Predicted GO
CC GO:0009654 photosystem II oxygen evolving complex IEP Predicted GO
MF GO:0019104 DNA N-glycosylase activity IEP Predicted GO
CC GO:0019898 extrinsic component of membrane IEP Predicted GO
BP GO:0033554 cellular response to stress IEP Predicted GO
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Predicted GO
BP GO:0051716 cellular response to stimulus IEP Predicted GO
MF GO:0140097 catalytic activity, acting on DNA IEP Predicted GO
InterPro domains Description Start Stop
IPR004367 Cyclin_C-dom 199 287
IPR006671 Cyclin_N 70 196
No external refs found!