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Description : MADS/AGL-type transcription factor
Gene families : OG_42_0000009 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Setaria italica: Seita.6G194800.1 | |
| Cluster | HCAA Clusters: Cluster_142 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| A4A49_07845 | No alias | agamous-like mads-box protein agl8 | 0.03 | Orthogroups_2024-Update | |
| A4A49_23145 | No alias | mads-box protein soc1 | 0.04 | Orthogroups_2024-Update | |
| At1g77950 | No alias | AGAMOUS-like 67 [Source:UniProtKB/TrEMBL;Acc:F4I8L6] | 0.03 | Orthogroups_2024-Update | |
| Bradi2g38695 | No alias | MADS-box transcription factor family protein | 0.02 | Orthogroups_2024-Update | |
| Bradi4g34680 | No alias | K-box region and MADS-box transcription factor family protein | 0.02 | Orthogroups_2024-Update | |
| Brara.C00582.1 | No alias | MADS/AGL-type transcription factor | 0.03 | Orthogroups_2024-Update | |
| Brara.C04645.1 | No alias | MADS/AGL-type transcription factor | 0.03 | Orthogroups_2024-Update | |
| Brara.E02241.1 | No alias | MADS/AGL-type transcription factor | 0.02 | Orthogroups_2024-Update | |
| Brara.I02486.1 | No alias | MADS/AGL-type transcription factor | 0.02 | Orthogroups_2024-Update | |
| Brara.J00749.1 | No alias | MADS/AGL-type transcription factor | 0.02 | Orthogroups_2024-Update | |
| Brara.K00198.1 | No alias | MADS/AGL-type transcription factor | 0.03 | Orthogroups_2024-Update | |
| GRMZM2G171365 | No alias | AGAMOUS-like 20 | 0.02 | Orthogroups_2024-Update | |
| Glyma.05G163200 | No alias | K-box region and MADS-box transcription factor family protein | 0.04 | Orthogroups_2024-Update | |
| Glyma.09G283800 | No alias | K-box region and MADS-box transcription factor family protein | 0.02 | Orthogroups_2024-Update | |
| Glyma.10G084700 | No alias | AGAMOUS-like 62 | 0.02 | Orthogroups_2024-Update | |
| Glyma.10G085100 | No alias | AGAMOUS-like 62 | 0.02 | Orthogroups_2024-Update | |
| Glyma.10G085600 | No alias | AGAMOUS-like 62 | 0.02 | Orthogroups_2024-Update | |
| Glyma.13G034100 | No alias | K-box region and MADS-box transcription factor family protein | 0.02 | Orthogroups_2024-Update | |
| HORVU2Hr1G080490.1 | No alias | MADS/AGL-type transcription factor | 0.03 | Orthogroups_2024-Update | |
| LOC_Os02g06860 | No alias | OsMADS80 - MADS-box family gene with M-alpha type-box, expressed | 0.03 | Orthogroups_2024-Update | |
| Potri.004G002400 | No alias | AGAMOUS-like 62 | 0.02 | Orthogroups_2024-Update | |
| Pp1s163_73V6 | No alias | mikc* mads-box transcription factor | 0.02 | Orthogroups_2024-Update | |
| Pp1s209_130V6 | No alias | mads-box transcription factor | 0.04 | Orthogroups_2024-Update | |
| Pp1s88_174V6 | No alias | mads box | 0.02 | Orthogroups_2024-Update | |
| Seita.2G002300.1 | No alias | regulatory protein *(AP1/CAL/FUL) of floral meristem... | 0.04 | Orthogroups_2024-Update | |
| Seita.2G266600.1 | No alias | regulatory protein *(SEPALLATA) of floral meristem... | 0.04 | Orthogroups_2024-Update | |
| Seita.6G156800.1 | No alias | MADS/AGL-type transcription factor | 0.02 | Orthogroups_2024-Update | |
| Sobic.001G314400.1 | No alias | MADS/AGL-type transcription factor | 0.03 | Orthogroups_2024-Update | |
| Sobic.002G258000.1 | No alias | regulatory protein *(SEPALLATA) of floral meristem... | 0.02 | Orthogroups_2024-Update | |
| Solyc10g017630 | No alias | MADS-box transcription factor (AHRD V3.3 *** Q1EMR8_PLAMJ) | 0.03 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003677 | DNA binding | IEA | 16Dec |
| MF | GO:0046983 | protein dimerization activity | IEA | 16Dec |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003690 | double-stranded DNA binding | IEP | Predicted GO |
| BP | GO:0005984 | disaccharide metabolic process | IEP | Predicted GO |
| BP | GO:0005985 | sucrose metabolic process | IEP | Predicted GO |
| BP | GO:0005986 | sucrose biosynthetic process | IEP | Predicted GO |
| BP | GO:0009311 | oligosaccharide metabolic process | IEP | Predicted GO |
| BP | GO:0009312 | oligosaccharide biosynthetic process | IEP | Predicted GO |
| MF | GO:0016788 | hydrolase activity, acting on ester bonds | IEP | Predicted GO |
| MF | GO:0016791 | phosphatase activity | IEP | Predicted GO |
| MF | GO:0019203 | carbohydrate phosphatase activity | IEP | Predicted GO |
| MF | GO:0030599 | pectinesterase activity | IEP | Predicted GO |
| BP | GO:0034637 | cellular carbohydrate biosynthetic process | IEP | Predicted GO |
| BP | GO:0042545 | cell wall modification | IEP | Predicted GO |
| BP | GO:0045229 | external encapsulating structure organization | IEP | Predicted GO |
| BP | GO:0046351 | disaccharide biosynthetic process | IEP | Predicted GO |
| MF | GO:0050307 | sucrose-phosphate phosphatase activity | IEP | Predicted GO |
| MF | GO:0050308 | sugar-phosphatase activity | IEP | Predicted GO |
| MF | GO:0052689 | carboxylic ester hydrolase activity | IEP | Predicted GO |
| BP | GO:0071554 | cell wall organization or biogenesis | IEP | Predicted GO |
| BP | GO:0071555 | cell wall organization | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002100 | TF_MADSbox | 10 | 57 |
| No external refs found! |