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  5. Seita.6G195000.1

Seita.6G195000.1


Description : E3 ubiquitin ligase *(RGLG) & E3 ubiquitin ligase *(RGLG)


Gene families : OG_42_0000469 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000469_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.6G195000.1
Cluster HCAA Clusters: Cluster_287

Target Alias Description ECC score Gene Family Method Actions
At5g14420 No alias E3 ubiquitin-protein ligase RGLG2... 0.02 Orthogroups_2024-Update
Brara.G02741.1 No alias E3 ubiquitin ligase *(RGLG) & E3 ubiquitin ligase *(RGLG) 0.02 Orthogroups_2024-Update
GRMZM2G477113 No alias RING domain ligase1 0.03 Orthogroups_2024-Update
Seita.5G421700.1 No alias E3 ubiquitin ligase *(RGLG) & E3 ubiquitin ligase *(RGLG) 0.04 Orthogroups_2024-Update
Seita.6G073900.1 No alias E3 ubiquitin ligase *(RGLG) & E3 ubiquitin ligase *(RGLG) 0.02 Orthogroups_2024-Update
Solyc05g053870 No alias E3 ubiquitin-protein ligase RGLG2 (AHRD V3.3 ***... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008168 methyltransferase activity IEP Predicted GO
MF GO:0008171 O-methyltransferase activity IEP Predicted GO
MF GO:0008649 rRNA methyltransferase activity IEP Predicted GO
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Predicted GO
MF GO:0046983 protein dimerization activity IEP Predicted GO
InterPro domains Description Start Stop
IPR010734 Copine 89 304
No external refs found!