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  5. Seita.6G200600.1

Seita.6G200600.1


Description : transcriptional co-activator *(BET/GTE)


Gene families : OG_42_0000275 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000275_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.6G200600.1
Cluster HCAA Clusters: Cluster_60

Target Alias Description ECC score Gene Family Method Actions
At1g06230 No alias Transcription factor GTE4... 0.02 Orthogroups_2024-Update
GRMZM2G006707 No alias bromodomain and extraterminal domain protein 10 0.04 Orthogroups_2024-Update
GRMZM2G127299 No alias bromodomain and extraterminal domain protein 9 0.03 Orthogroups_2024-Update
Glyma.12G122100 No alias global transcription factor group E4 0.03 Orthogroups_2024-Update
Glyma.13G292200 No alias global transcription factor group E4 0.02 Orthogroups_2024-Update
Glyma.16G062200 No alias global transcription factor group E8 0.03 Orthogroups_2024-Update
Sobic.002G313300.1 No alias transcriptional co-activator *(BET/GTE) 0.03 Orthogroups_2024-Update
Solyc07g062660 No alias Transcription factor GTE4 (AHRD V3.3 *** A0A0B2R809_GLYSO) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEP Predicted GO
MF GO:0008134 transcription factor binding IEP Predicted GO
MF GO:0017025 TBP-class protein binding IEP Predicted GO
MF GO:0019787 ubiquitin-like protein transferase activity IEP Predicted GO
CC GO:0043227 membrane-bounded organelle IEP Predicted GO
CC GO:0043231 intracellular membrane-bounded organelle IEP Predicted GO
MF GO:0061659 ubiquitin-like protein ligase activity IEP Predicted GO
MF GO:0061666 UFM1 ligase activity IEP Predicted GO
CC GO:0070531 BRCA1-A complex IEP Predicted GO
CC GO:0070552 BRISC complex IEP Predicted GO
MF GO:0071568 UFM1 transferase activity IEP Predicted GO
BP GO:0071569 protein ufmylation IEP Predicted GO
InterPro domains Description Start Stop
IPR027353 NET_dom 508 569
IPR001487 Bromodomain 343 425
No external refs found!