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  5. Seita.6G221500.1

Seita.6G221500.1


Description : beta-type-6 component *(PBF) of 26S proteasome


Gene families : OG_42_0003699 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003699_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.6G221500.1
Cluster HCAA Clusters: Cluster_89

Target Alias Description ECC score Gene Family Method Actions
Cre26.g756797 No alias N-terminal nucleophile aminohydrolases (Ntn hydrolases)... 0.06 Orthogroups_2024-Update
Kfl00316_0060 kfl00316_0060_v1.1 (o82531|psb1_pethy : 343.0) Proteasome subunit beta type... 0.05 Orthogroups_2024-Update
LOC_Os09g32800 No alias peptidase, T1 family, putative, expressed 0.02 Orthogroups_2024-Update
Potri.014G069800 No alias N-terminal nucleophile aminohydrolases (Ntn hydrolases)... 0.03 Orthogroups_2024-Update
Sobic.007G195100.1 No alias beta-type-6 component *(PBF) of 26S proteasome 0.04 Orthogroups_2024-Update
Sopen02g029590 No alias Proteasome subunit 0.05 Orthogroups_2024-Update
evm.model.contig_2127.6 No alias (o82531|psb1_pethy : 213.0) Proteasome subunit beta type... 0.02 Orthogroups_2024-Update
evm.model.tig00001339.5 No alias (at3g60820 : 231.0) Encodes 20S proteasome beta subunit... 0.06 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0005839 proteasome core complex IEA 16Dec
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Predicted GO
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Predicted GO
BP GO:0006099 tricarboxylic acid cycle IEP Predicted GO
BP GO:0006101 citrate metabolic process IEP Predicted GO
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Predicted GO
CC GO:0008250 oligosaccharyltransferase complex IEP Predicted GO
BP GO:0009056 catabolic process IEP Predicted GO
BP GO:0009057 macromolecule catabolic process IEP Predicted GO
MF GO:0009916 alternative oxidase activity IEP Predicted GO
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Predicted GO
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Predicted GO
MF GO:0016859 cis-trans isomerase activity IEP Predicted GO
BP GO:0016999 antibiotic metabolic process IEP Predicted GO
BP GO:0018193 peptidyl-amino acid modification IEP Predicted GO
BP GO:0018208 peptidyl-proline modification IEP Predicted GO
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Predicted GO
BP GO:0019941 modification-dependent protein catabolic process IEP Predicted GO
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Predicted GO
BP GO:0044248 cellular catabolic process IEP Predicted GO
BP GO:0044265 cellular macromolecule catabolic process IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
CC GO:0044432 endoplasmic reticulum part IEP Predicted GO
CC GO:0045273 respiratory chain complex II IEP Predicted GO
BP GO:0072350 tricarboxylic acid metabolic process IEP Predicted GO
CC GO:0098796 membrane protein complex IEP Predicted GO
CC GO:0098803 respiratory chain complex IEP Predicted GO
BP GO:1901575 organic substance catabolic process IEP Predicted GO
CC GO:1990234 transferase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR001353 Proteasome_sua/b 9 204
No external refs found!