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  5. Seita.6G223400.1

Seita.6G223400.1


Description : regulatory protein *(SEPALLATA) of floral meristem identity control & MADS/AGL-type transcription factor


Gene families : OG_42_0000009 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.6G223400.1
Cluster HCAA Clusters: Cluster_63

Target Alias Description ECC score Gene Family Method Actions
A4A49_14235 No alias developmental protein sepallata 1 0.02 Orthogroups_2024-Update
A4A49_16645 No alias agamous-like mads-box protein agl11 0.03 Orthogroups_2024-Update
A4A49_18989 No alias agamous-like mads-box protein agl19 0.04 Orthogroups_2024-Update
A4A49_19521 No alias developmental protein sepallata 1 0.02 Orthogroups_2024-Update
At2g45650 No alias AGAMOUS-like protein 6 [Source:UniProtKB/TrEMBL;Acc:Q1PEU3] 0.03 Orthogroups_2024-Update
At5g51870 No alias AGAMOUS-like 71 [Source:TAIR;Acc:AT5G51870] 0.05 Orthogroups_2024-Update
Bradi3g32090 No alias AGAMOUS-like 20 0.03 Orthogroups_2024-Update
Brara.B03768.1 No alias MADS/AGL-type transcription factor 0.04 Orthogroups_2024-Update
Brara.B03794.1 No alias MADS/AGL-type transcription factor 0.03 Orthogroups_2024-Update
Brara.C04259.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Brara.E02241.1 No alias MADS/AGL-type transcription factor 0.03 Orthogroups_2024-Update
Brara.G00861.1 No alias regulatory protein *(SEPALLATA) of floral meristem... 0.03 Orthogroups_2024-Update
Brara.G03542.1 No alias MADS/AGL-type transcription factor 0.03 Orthogroups_2024-Update
Brara.J00749.1 No alias MADS/AGL-type transcription factor 0.03 Orthogroups_2024-Update
Cre11.g467577 No alias AGAMOUS-like 79 0.03 Orthogroups_2024-Update
GRMZM2G003514 No alias AGAMOUS-like 6 0.04 Orthogroups_2024-Update
GRMZM2G010669 No alias K-box region and MADS-box transcription factor family protein 0.03 Orthogroups_2024-Update
GRMZM2G152415 No alias AGAMOUS-like 66 0.04 Orthogroups_2024-Update
GRMZM2G159397 No alias K-box region and MADS-box transcription factor family protein 0.03 Orthogroups_2024-Update
Glyma.13G052100 No alias AGAMOUS-like 8 0.03 Orthogroups_2024-Update
Glyma.13G052700 No alias K-box region and MADS-box transcription factor family protein 0.02 Orthogroups_2024-Update
HORVU0Hr1G003020.3 No alias regulatory protein *(AP1/CAL/FUL) of floral meristem... 0.02 Orthogroups_2024-Update
LOC_Os10g39130 No alias OsMADS56 - MADS-box family gene with MIKCc type-box, expressed 0.02 Orthogroups_2024-Update
Potri.003G170200 No alias AGAMOUS-like 8 0.02 Orthogroups_2024-Update
Potri.004G064300 No alias K-box region and MADS-box transcription factor family protein 0.02 Orthogroups_2024-Update
Potri.017G099800 No alias AGAMOUS-like 8 0.02 Orthogroups_2024-Update
Pp1s55_280V6 No alias mikc* mads-box transcription factor 0.03 Orthogroups_2024-Update
Solyc06g035570 No alias No description available 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA 16Dec
MF GO:0003700 DNA-binding transcription factor activity IEA 16Dec
CC GO:0005634 nucleus IEA 16Dec
BP GO:0006355 regulation of transcription, DNA-templated IEA 16Dec
MF GO:0046983 protein dimerization activity IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003774 motor activity IEP Predicted GO
MF GO:0003777 microtubule motor activity IEP Predicted GO
BP GO:0006928 movement of cell or subcellular component IEP Predicted GO
BP GO:0007017 microtubule-based process IEP Predicted GO
BP GO:0007018 microtubule-based movement IEP Predicted GO
MF GO:0008017 microtubule binding IEP Predicted GO
MF GO:0015631 tubulin binding IEP Predicted GO
InterPro domains Description Start Stop
IPR002100 TF_MADSbox 10 57
IPR002487 TF_Kbox 86 175
No external refs found!