1. Home
  2. Species
  3. Setaria italica
  4. Sequence
  5. Seita.6G227500.1

Seita.6G227500.1


Description : Unknown function


Gene families : OG_42_0001542 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001542_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.6G227500.1
Cluster HCAA Clusters: Cluster_333

Target Alias Description ECC score Gene Family Method Actions
75093 No alias Function unknown 0.03 Orthogroups_2024-Update
Bradi3g41620 No alias Function unknown 0.03 Orthogroups_2024-Update
Glyma.03G078900 No alias Function unknown 0.02 Orthogroups_2024-Update
Glyma.04G118000 No alias Function unknown 0.02 Orthogroups_2024-Update
Glyma.04G118300 No alias Function unknown 0.02 Orthogroups_2024-Update
Glyma.04G118400 No alias Function unknown 0.03 Orthogroups_2024-Update
Glyma.15G131400 No alias Function unknown 0.03 Orthogroups_2024-Update
Potri.015G108500 No alias Function unknown 0.02 Orthogroups_2024-Update
Pp1s252_55V6 No alias MAC9.6; expressed protein [Arabidopsis thaliana] 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000347 THO complex IEP Predicted GO
CC GO:0000445 THO complex part of transcription export complex IEP Predicted GO
MF GO:0005507 copper ion binding IEP Predicted GO
MF GO:0008234 cysteine-type peptidase activity IEP Predicted GO
BP GO:0009116 nucleoside metabolic process IEP Predicted GO
BP GO:0019321 pentose metabolic process IEP Predicted GO
BP GO:0019566 arabinose metabolic process IEP Predicted GO
BP GO:0046373 L-arabinose metabolic process IEP Predicted GO
MF GO:0046556 alpha-L-arabinofuranosidase activity IEP Predicted GO
BP GO:1901657 glycosyl compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR011692 Stress_up-reg_Nod19 46 407
No external refs found!