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  5. Seita.6G230200.1

Seita.6G230200.1


Description : RBR-Ariadne-class E3 ubiquitin ligase


Gene families : OG_42_0000347 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000347_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.6G230200.1
Cluster HCAA Clusters: Cluster_60

Target Alias Description ECC score Gene Family Method Actions
178621 No alias IBR domain-containing protein 0.02 Orthogroups_2024-Update
Bradi3g41760 No alias IBR domain-containing protein 0.03 Orthogroups_2024-Update
Bradi3g48130 No alias IBR domain-containing protein 0.08 Orthogroups_2024-Update
Cre17.g721950 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G100913 No alias IBR domain-containing protein 0.03 Orthogroups_2024-Update
GRMZM5G876621 No alias IBR domain-containing protein 0.03 Orthogroups_2024-Update
Glyma.11G121300 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Glyma.11G129000 No alias IBR domain-containing protein 0.04 Orthogroups_2024-Update
Glyma.15G031100 No alias IBR domain-containing protein 0.03 Orthogroups_2024-Update
HORVU6Hr1G055260.4 No alias RBR-Ariadne-class E3 ubiquitin ligase 0.05 Orthogroups_2024-Update
Kfl00084_0120 kfl00084_0120_v1.1 (at2g16090 : 575.0) ARIADNE 2 (ARI2); FUNCTIONS IN: zinc... 0.02 Orthogroups_2024-Update
MA_88915g0010 No alias (at1g65430 : 735.0) ARIADNE 8 (ARI8); FUNCTIONS IN:... 0.03 Orthogroups_2024-Update
Potri.002G131200 No alias IBR domain-containing protein 0.03 Orthogroups_2024-Update
Potri.008G077100 No alias IBR domain-containing protein 0.03 Orthogroups_2024-Update
Sobic.006G131000.1 No alias RBR-Ariadne-class E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Solyc11g008580 No alias RING/U-box superfamily protein (AHRD V3.3 *** AT1G05890.1) 0.04 Orthogroups_2024-Update
Sopen06g029720 No alias IBR domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004143 diacylglycerol kinase activity IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0007186 G protein-coupled receptor signaling pathway IEP Predicted GO
BP GO:0007205 protein kinase C-activating G protein-coupled receptor signaling pathway IEP Predicted GO
BP GO:0009890 negative regulation of biosynthetic process IEP Predicted GO
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
BP GO:0031324 negative regulation of cellular metabolic process IEP Predicted GO
BP GO:0031327 negative regulation of cellular biosynthetic process IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
BP GO:0045892 negative regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0045934 negative regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0051172 negative regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051253 negative regulation of RNA metabolic process IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
BP GO:1902679 negative regulation of RNA biosynthetic process IEP Predicted GO
BP GO:1903507 negative regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000113 negative regulation of cellular macromolecule biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR002867 IBR_dom 302 350
IPR002867 IBR_dom 224 285
No external refs found!