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  5. Seita.6G230900.1

Seita.6G230900.1


Description : Unknown function


Gene families : OG_42_0000172 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000172_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.6G230900.1
Cluster HCAA Clusters: Cluster_247

Target Alias Description ECC score Gene Family Method Actions
A4A49_38013 No alias lrr receptor-like serinethreonine-protein kinase gso2 0.02 Orthogroups_2024-Update
Bradi1g44425 No alias disease resistance family protein / LRR family protein 0.04 Orthogroups_2024-Update
Bradi2g42820 No alias disease resistance family protein / LRR family protein 0.06 Orthogroups_2024-Update
Bradi3g05292 No alias disease resistance family protein / LRR family protein 0.05 Orthogroups_2024-Update
Bradi3g18400 No alias disease resistance family protein / LRR family protein 0.02 Orthogroups_2024-Update
Bradi3g41810 No alias disease resistance family protein / LRR family protein 0.04 Orthogroups_2024-Update
Bradi3g51110 No alias disease resistance family protein / LRR family protein 0.04 Orthogroups_2024-Update
Glyma.10G129000 No alias disease resistance family protein / LRR family protein 0.02 Orthogroups_2024-Update
LOC_Os01g41780 No alias expressed protein 0.02 Orthogroups_2024-Update
LOC_Os11g35450 No alias leucine-rich repeat receptor protein kinase EXS... 0.02 Orthogroups_2024-Update
LOC_Os11g35980 No alias leucine rich repeat protein, putative, expressed 0.03 Orthogroups_2024-Update
Potri.015G024700 No alias disease resistance family protein / LRR family protein 0.03 Orthogroups_2024-Update
Seita.8G055500.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Sobic.003G100500.2 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.003G210601.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.005G127800.1 No alias Unknown function 0.06 Orthogroups_2024-Update
Sobic.007G080780.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.009G012900.1 No alias Unknown function 0.07 Orthogroups_2024-Update
Sopen01g042800 No alias Leucine rich repeat N-terminal domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predicted GO
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
MF GO:0001871 pattern binding IEP Predicted GO
MF GO:0003682 chromatin binding IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
MF GO:0005509 calcium ion binding IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
CC GO:0005681 spliceosomal complex IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
BP GO:0006807 nitrogen compound metabolic process IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
BP GO:0009987 cellular process IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016763 transferase activity, transferring pentosyl groups IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
MF GO:0030246 carbohydrate binding IEP Predicted GO
MF GO:0030247 polysaccharide binding IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
BP GO:0043170 macromolecule metabolic process IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
BP GO:0044237 cellular metabolic process IEP Predicted GO
BP GO:0044238 primary metabolic process IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
BP GO:1901564 organonitrogen compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 748 804
IPR001611 Leu-rich_rpt 442 502
IPR001611 Leu-rich_rpt 561 580
IPR013210 LRR_N_plant-typ 29 65
No external refs found!