Seita.6G232500.1


Description : TGA-type transcription factor


Gene families : OG_42_0000327 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000327_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.6G232500.1
Cluster HCAA Clusters: Cluster_273

Target Alias Description ECC score Gene Family Method Actions
A4A49_33268 No alias tgacg-sequence-specific dna-binding protein tga-2.1 0.02 Orthogroups_2024-Update
At1g68640 No alias Transcription factor PERIANTHIA... 0.02 Orthogroups_2024-Update
At1g77920 No alias Transcription factor TGA7... 0.03 Orthogroups_2024-Update
Bradi3g07031 No alias bZIP transcription factor family protein 0.02 Orthogroups_2024-Update
Brara.B03942.1 No alias TGA-type transcription factor 0.03 Orthogroups_2024-Update
Glyma.12G088700 No alias bZIP transcription factor family protein 0.03 Orthogroups_2024-Update
Glyma.12G184500 No alias bZIP transcription factor family protein 0.02 Orthogroups_2024-Update
LOC_Os03g20310 No alias transcription factor HBP-1b, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os09g31390 No alias transcription factor, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os12g05680 No alias transcription factor, putative, expressed 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA 16Dec
BP GO:0006351 transcription, DNA-templated IEA 16Dec
BP GO:0006355 regulation of transcription, DNA-templated IEA 16Dec
MF GO:0043565 sequence-specific DNA binding IEA 16Dec
Type GO Term Name Evidence Source
MF GO:0004497 monooxygenase activity IEP Predicted GO
MF GO:0005384 manganese ion transmembrane transporter activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
MF GO:0005507 copper ion binding IEP Predicted GO
BP GO:0006873 cellular ion homeostasis IEP Predicted GO
BP GO:0006875 cellular metal ion homeostasis IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
BP GO:0019725 cellular homeostasis IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
BP GO:0030003 cellular cation homeostasis IEP Predicted GO
BP GO:0030026 cellular manganese ion homeostasis IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Predicted GO
BP GO:0046916 cellular transition metal ion homeostasis IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
BP GO:0048878 chemical homeostasis IEP Predicted GO
BP GO:0050801 ion homeostasis IEP Predicted GO
BP GO:0055065 metal ion homeostasis IEP Predicted GO
BP GO:0055071 manganese ion homeostasis IEP Predicted GO
BP GO:0055076 transition metal ion homeostasis IEP Predicted GO
BP GO:0055080 cation homeostasis IEP Predicted GO
BP GO:0055082 cellular chemical homeostasis IEP Predicted GO
BP GO:0098771 inorganic ion homeostasis IEP Predicted GO
InterPro domains Description Start Stop
IPR025422 TGA_domain 184 257
IPR004827 bZIP 104 133
No external refs found!