1. Home
  2. Species
  3. Setaria italica
  4. Sequence
  5. Seita.6G234000.1

Seita.6G234000.1


Description : bHLH-type transcription factor


Gene families : OG_42_0003348 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003348_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.6G234000.1
Cluster HCAA Clusters: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
Glyma.02G088050 No alias Basic helix-loop-helix (bHLH) DNA-binding family protein 0.05 Orthogroups_2024-Update
Seita.6G233600.1 No alias bHLH-type transcription factor 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Predicted GO
MF GO:0005546 phosphatidylinositol-4,5-bisphosphate binding IEP Predicted GO
BP GO:0006887 exocytosis IEP Predicted GO
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Predicted GO
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Predicted GO
MF GO:0030599 pectinesterase activity IEP Predicted GO
BP GO:0032940 secretion by cell IEP Predicted GO
MF GO:0035091 phosphatidylinositol binding IEP Predicted GO
BP GO:0042545 cell wall modification IEP Predicted GO
CC GO:0044448 cell cortex part IEP Predicted GO
BP GO:0045229 external encapsulating structure organization IEP Predicted GO
BP GO:0046903 secretion IEP Predicted GO
MF GO:0051213 dioxygenase activity IEP Predicted GO
BP GO:0071555 cell wall organization IEP Predicted GO
CC GO:0099023 tethering complex IEP Predicted GO
MF GO:1901981 phosphatidylinositol phosphate binding IEP Predicted GO
MF GO:1902936 phosphatidylinositol bisphosphate binding IEP Predicted GO
InterPro domains Description Start Stop
IPR011598 bHLH_dom 102 147
No external refs found!