Seita.6G234600.1

Description : subfamily ABCG transporter

Gene families : OG_42_0000055 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000055_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria italica: Seita.6G234600.1
Cluster	HCAA Clusters: Cluster_12

Target	Alias	Description	ECC score	Gene Family Method
115821	No alias	ABC-2 and Plant PDR ABC-type transporter family protein	0.02	Orthogroups_2024-Update
Bradi2g43120	No alias	pleiotropic drug resistance 12	0.02	Orthogroups_2024-Update
Cre12.g540650	No alias	pleiotropic drug resistance 3	0.02	Orthogroups_2024-Update
GRMZM2G143139	No alias	pleiotropic drug resistance 12	0.02	Orthogroups_2024-Update
Glyma.08G201300	No alias	ABC-2 and Plant PDR ABC-type transporter family protein	0.03	Orthogroups_2024-Update
Glyma.15G011900	No alias	pleiotropic drug resistance 12	0.04	Orthogroups_2024-Update
LOC_Os01g42380	No alias	pleiotropic drug resistance protein, putative, expressed	0.03	Orthogroups_2024-Update
LOC_Os06g36090	No alias	ABC-2 type transporter, putative, expressed	0.03	Orthogroups_2024-Update
Mp8g09300.1	No alias	subfamily ABCG transporter	0.03	Orthogroups_2024-Update
Potri.001G251100	No alias	pleiotropic drug resistance 3	0.03	Orthogroups_2024-Update
Pp1s180_26V6	No alias	atp-binding cassette	0.02	Orthogroups_2024-Update
Pp1s36_257V6	No alias	atp-binding cassette	0.02	Orthogroups_2024-Update
Seita.5G302300.1	No alias	subfamily ABCG transporter	0.02	Orthogroups_2024-Update
Sopen05g032110	No alias	ABC-2 type transporter	0.02	Orthogroups_2024-Update
evm.model.contig_440.1	No alias	(at2g29940 : 522.0) pleiotropic drug resistance 3...	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	16Dec
CC	GO:0005575	cellular_component	None	Extended
MF	GO:0008144	drug binding	None	Extended
CC	GO:0016020	membrane	IEA	16Dec
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003723	RNA binding	IEP	Predicted GO
BP	GO:0006413	translational initiation	IEP	Predicted GO
MF	GO:0008373	sialyltransferase activity	IEP	Predicted GO
MF	GO:0016667	oxidoreductase activity, acting on a sulfur group of donors	IEP	Predicted GO
MF	GO:0016671	oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	IEP	Predicted GO
MF	GO:0033743	peptide-methionine (R)-S-oxide reductase activity	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR013581	PDR_assoc	666	727
IPR003439	ABC_transporter-like	788	939
IPR003439	ABC_transporter-like	113	292
IPR029481	ABC_trans_N	38	86
IPR013525	ABC_2_trans	447	658
IPR013525	ABC_2_trans	1085	1298

External Links

No external refs found!