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  5. Seita.6G247000.1

Seita.6G247000.1


Description : C2H2 subclass IDD transcription factor


Gene families : OG_42_0000119 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000119_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.6G247000.1
Cluster HCAA Clusters: Cluster_164

Target Alias Description ECC score Gene Family Method Actions
At1g68130 No alias Protein indeterminate-domain 14... 0.03 Orthogroups_2024-Update
Brara.B02772.1 No alias C2H2 subclass IDD transcription factor 0.02 Orthogroups_2024-Update
Brara.I04981.1 No alias C2H2 subclass IDD transcription factor 0.03 Orthogroups_2024-Update
Glyma.10G051500 No alias C2H2-like zinc finger protein 0.04 Orthogroups_2024-Update
Glyma.14G095900 No alias indeterminate(ID)-domain 7 0.03 Orthogroups_2024-Update
Glyma.16G141100 No alias C2H2-like zinc finger protein 0.02 Orthogroups_2024-Update
Glyma.20G005900 No alias indeterminate(ID)-domain 5 0.02 Orthogroups_2024-Update
HORVU2Hr1G036710.3 No alias C2H2 subclass IDD transcription factor 0.03 Orthogroups_2024-Update
LOC_Os01g09850 No alias ZOS1-04 - C2H2 zinc finger protein, expressed 0.03 Orthogroups_2024-Update
MA_10436688g0010 No alias (at1g68130 : 189.0) indeterminate(ID)-domain 14 (IDD14);... 0.02 Orthogroups_2024-Update
Mp5g20530.1 No alias C2H2 zinc finger transcription factor 0.02 Orthogroups_2024-Update
Potri.015G033100 No alias C2H2-like zinc finger protein 0.03 Orthogroups_2024-Update
Sobic.002G353700.1 No alias C2H2 subclass IDD transcription factor 0.02 Orthogroups_2024-Update
Solyc06g075250 No alias Zinc finger family protein (AHRD V3.3 *** S8C619_9LAMI) 0.02 Orthogroups_2024-Update
Sopen10g033630 No alias Zinc finger, C2H2 type 0.04 Orthogroups_2024-Update
Sopen11g027970 No alias Zinc finger, C2H2 type 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Predicted GO
CC GO:0000786 nucleosome IEP Predicted GO
MF GO:0004180 carboxypeptidase activity IEP Predicted GO
MF GO:0004185 serine-type carboxypeptidase activity IEP Predicted GO
MF GO:0004673 protein histidine kinase activity IEP Predicted GO
BP GO:0006325 chromatin organization IEP Predicted GO
BP GO:0006334 nucleosome assembly IEP Predicted GO
MF GO:0008238 exopeptidase activity IEP Predicted GO
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Predicted GO
MF GO:0032182 ubiquitin-like protein binding IEP Predicted GO
CC GO:0032993 protein-DNA complex IEP Predicted GO
BP GO:0034728 nucleosome organization IEP Predicted GO
MF GO:0043130 ubiquitin binding IEP Predicted GO
MF GO:0043531 ADP binding IEP Predicted GO
CC GO:0044815 DNA packaging complex IEP Predicted GO
MF GO:0070008 serine-type exopeptidase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR022755 Znf_C2H2_jaz 66 88
No external refs found!