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  5. Solyc03g112150

Solyc03g112150


Description : Elongation factor Tu (AHRD V3.3 *** K4BK69_SOLLC)


Gene families : OG_42_0001287 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001287_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc03g112150
Cluster HCCA clusters: Cluster_65

Target Alias Description ECC score Gene Family Method Actions
HORVU6Hr1G053680.5 No alias translation elongation factor *(EF-Tu) 0.05 Orthogroups_2024-Update
Pp1s16_25V6 No alias elongation factor tu 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000275 mitochondrial proton-transporting ATP synthase complex, catalytic core F(1) IEP Predicted GO
MF GO:0003743 translation initiation factor activity IEP Predicted GO
MF GO:0004089 carbonate dehydratase activity IEP Predicted GO
MF GO:0004222 metalloendopeptidase activity IEP Predicted GO
MF GO:0004807 triose-phosphate isomerase activity IEP Predicted GO
BP GO:0006486 protein glycosylation IEP Predicted GO
MF GO:0008237 metallopeptidase activity IEP Predicted GO
MF GO:0008378 galactosyltransferase activity IEP Predicted GO
MF GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity IEP Predicted GO
MF GO:0016836 hydro-lyase activity IEP Predicted GO
MF GO:0016860 intramolecular oxidoreductase activity IEP Predicted GO
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Predicted GO
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP Predicted GO
BP GO:0043413 macromolecule glycosylation IEP Predicted GO
CC GO:0044455 mitochondrial membrane part IEP Predicted GO
CC GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1) IEP Predicted GO
CC GO:0098798 mitochondrial protein complex IEP Predicted GO
CC GO:0098800 inner mitochondrial membrane protein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR004160 Transl_elong_EFTu/EF1A_C 376 475
IPR004161 EFTu-like_2 303 371
No external refs found!