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  5. Seita.6G250600.1

Seita.6G250600.1


Description : PLATZ-type transcription factor


Gene families : OG_42_0000211 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000211_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.6G250600.1
Cluster HCAA Clusters: Cluster_25

Target Alias Description ECC score Gene Family Method Actions
A4A49_05295 No alias hypothetical protein 0.03 Orthogroups_2024-Update
A4A49_35786 No alias hypothetical protein 0.05 Orthogroups_2024-Update
At1g76590 No alias At1g76590 [Source:UniProtKB/TrEMBL;Acc:Q2HIW3] 0.04 Orthogroups_2024-Update
At5g46710 No alias At5g46710 [Source:UniProtKB/TrEMBL;Acc:Q9FIQ4] 0.04 Orthogroups_2024-Update
Bradi1g35697 No alias PLATZ transcription factor family protein 0.03 Orthogroups_2024-Update
Brara.C04068.1 No alias PLATZ-type transcription factor 0.04 Orthogroups_2024-Update
Brara.H00596.1 No alias PLATZ-type transcription factor 0.03 Orthogroups_2024-Update
Brara.H00909.1 No alias PLATZ-type transcription factor 0.03 Orthogroups_2024-Update
Brara.K00478.1 No alias PLATZ-type transcription factor 0.04 Orthogroups_2024-Update
Glyma.01G078600 No alias PLATZ transcription factor family protein 0.03 Orthogroups_2024-Update
Glyma.09G205300 No alias PLATZ transcription factor family protein 0.03 Orthogroups_2024-Update
Glyma.11G109100 No alias PLATZ transcription factor family protein 0.02 Orthogroups_2024-Update
Glyma.12G083000 No alias PLATZ transcription factor family protein 0.02 Orthogroups_2024-Update
Glyma.13G147800 No alias PLATZ transcription factor family protein 0.03 Orthogroups_2024-Update
Glyma.15G200100 No alias PLATZ transcription factor family protein 0.03 Orthogroups_2024-Update
HORVU1Hr1G050480.1 No alias PLATZ-type transcription factor 0.04 Orthogroups_2024-Update
HORVU2Hr1G106020.2 No alias PLATZ-type transcription factor 0.03 Orthogroups_2024-Update
Potri.014G059300 No alias PLATZ transcription factor family protein 0.03 Orthogroups_2024-Update
Pp1s441_8V6 No alias zinc ion binding 0.02 Orthogroups_2024-Update
Seita.7G218800.1 No alias PLATZ-type transcription factor 0.04 Orthogroups_2024-Update
Sopen08g001120 No alias PLATZ transcription factor 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000776 kinetochore IEP Predicted GO
BP GO:0003006 developmental process involved in reproduction IEP Predicted GO
MF GO:0004527 exonuclease activity IEP Predicted GO
BP GO:0007275 multicellular organism development IEP Predicted GO
MF GO:0008168 methyltransferase activity IEP Predicted GO
MF GO:0008408 3'-5' exonuclease activity IEP Predicted GO
BP GO:0009790 embryo development IEP Predicted GO
BP GO:0009793 embryo development ending in seed dormancy IEP Predicted GO
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Predicted GO
MF GO:0016840 carbon-nitrogen lyase activity IEP Predicted GO
MF GO:0016843 amine-lyase activity IEP Predicted GO
MF GO:0016844 strictosidine synthase activity IEP Predicted GO
BP GO:0022414 reproductive process IEP Predicted GO
BP GO:0032501 multicellular organismal process IEP Predicted GO
BP GO:0034508 centromere complex assembly IEP Predicted GO
BP GO:0065004 protein-DNA complex assembly IEP Predicted GO
BP GO:0071824 protein-DNA complex subunit organization IEP Predicted GO
InterPro domains Description Start Stop
IPR006734 DUF597 72 150
No external refs found!