1. Home
  2. Species
  3. Setaria italica
  4. Sequence
  5. Seita.6G254000.1

Seita.6G254000.1


Description : Unknown function


Gene families : OG_42_0000641 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000641_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.6G254000.1
Cluster HCAA Clusters: Cluster_93

Target Alias Description ECC score Gene Family Method Actions
Brara.F01083.1 No alias component *(MED15) of tail module of MEDIATOR... 0.02 Orthogroups_2024-Update
Brara.F01086.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Mp1g03020.1 No alias no hits & (original description: none) 0.03 Orthogroups_2024-Update
Potri.003G029000 No alias Function unknown 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000381 regulation of alternative mRNA splicing, via spliceosome IEP Predicted GO
BP GO:0006354 DNA-templated transcription, elongation IEP Predicted GO
BP GO:0006368 transcription elongation from RNA polymerase II promoter IEP Predicted GO
CC GO:0008023 transcription elongation factor complex IEP Predicted GO
MF GO:0035673 oligopeptide transmembrane transporter activity IEP Predicted GO
MF GO:0042887 amide transmembrane transporter activity IEP Predicted GO
BP GO:0043484 regulation of RNA splicing IEP Predicted GO
CC GO:0044451 nucleoplasm part IEP Predicted GO
BP GO:0048024 regulation of mRNA splicing, via spliceosome IEP Predicted GO
BP GO:0050684 regulation of mRNA processing IEP Predicted GO
CC GO:0070449 elongin complex IEP Predicted GO
BP GO:1903311 regulation of mRNA metabolic process IEP Predicted GO
MF GO:1904680 peptide transmembrane transporter activity IEP Predicted GO
InterPro domains Description Start Stop
IPR036546 MED15_KIX 34 105
No external refs found!