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  5. Seita.6G254200.1

Seita.6G254200.1


Description : substrate adaptor of SCF E3 ubiquitin ligase complex


Gene families : OG_42_0003451 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003451_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.6G254200.1
Cluster HCAA Clusters: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
LOC_Os02g26670 No alias F-box/Kelch-repeat protein, putative, expressed 0.02 Orthogroups_2024-Update
MA_10430159g0010 No alias (at1g23390 : 94.4) Kelch repeat-containing F-box family... 0.03 Orthogroups_2024-Update
MA_71872g0010 No alias (at3g24760 : 322.0) Galactose oxidase/kelch repeat... 0.03 Orthogroups_2024-Update
Pp1s293_88V6 No alias F28C11.3; kelch repeat-containing F-box family protein... 0.04 Orthogroups_2024-Update
Pp1s59_112V6 No alias No description available 0.04 Orthogroups_2024-Update
Sobic.003G271201.1 No alias Unknown function 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Predicted GO
MF GO:0004180 carboxypeptidase activity IEP Predicted GO
MF GO:0004185 serine-type carboxypeptidase activity IEP Predicted GO
BP GO:0006952 defense response IEP Predicted GO
BP GO:0008150 biological_process IEP Predicted GO
MF GO:0008238 exopeptidase activity IEP Predicted GO
BP GO:0016052 carbohydrate catabolic process IEP Predicted GO
MF GO:0016160 amylase activity IEP Predicted GO
MF GO:0016161 beta-amylase activity IEP Predicted GO
BP GO:0040008 regulation of growth IEP Predicted GO
BP GO:0045927 positive regulation of growth IEP Predicted GO
BP GO:0048518 positive regulation of biological process IEP Predicted GO
MF GO:0070008 serine-type exopeptidase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001810 F-box_dom 18 45
No external refs found!