1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc01g018020

Solyc01g018020


Description : Transketolase, putative (AHRD V3.3 *** B9T0B2_RICCO)


Gene families : OG_42_0002327 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002327_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc01g018020
Cluster HCCA clusters: Cluster_159


Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
CC GO:0005622 intracellular IEP Predicted GO
CC GO:0005681 spliceosomal complex IEP Predicted GO
BP GO:0006397 mRNA processing IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
CC GO:1990904 ribonucleoprotein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR005475 Transketolase-like_Pyr-bd 449 618
IPR033248 Transketolase_C 643 751
IPR005474 Transketolase_N 97 424
No external refs found!