Description : tRNA uridine-methyltransferase *(TRM2) & EC_2.1 transferase transferring one-carbon group
Gene families : OG_42_0005895 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005895_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Setaria italica: Seita.7G006100.1 | |
Cluster | HCAA Clusters: Cluster_37 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Bradi5g02300 | No alias | zinc finger (CCCH-type) family protein | 0.04 | Orthogroups_2024-Update | |
Kfl00492_0010 | kfl00492_0010_v1.1 | (at2g28450 : 372.0) zinc finger (CCCH-type) family... | 0.02 | Orthogroups_2024-Update | |
LOC_Os04g01480 | No alias | zinc finger C-x8-C-x5-C-x3-H type family protein, expressed | 0.02 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0006396 | RNA processing | IEA | 16Dec |
MF | GO:0008173 | RNA methyltransferase activity | IEA | 16Dec |
MF | GO:0046872 | metal ion binding | IEA | 16Dec |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003697 | single-stranded DNA binding | IEP | Predicted GO |
MF | GO:0003735 | structural constituent of ribosome | IEP | Predicted GO |
MF | GO:0005198 | structural molecule activity | IEP | Predicted GO |
CC | GO:0005634 | nucleus | IEP | Predicted GO |
BP | GO:0006412 | translation | IEP | Predicted GO |
BP | GO:0006518 | peptide metabolic process | IEP | Predicted GO |
BP | GO:0008033 | tRNA processing | IEP | Predicted GO |
MF | GO:0008483 | transaminase activity | IEP | Predicted GO |
MF | GO:0016769 | transferase activity, transferring nitrogenous groups | IEP | Predicted GO |
MF | GO:0019899 | enzyme binding | IEP | Predicted GO |
MF | GO:0031267 | small GTPase binding | IEP | Predicted GO |
BP | GO:0043043 | peptide biosynthetic process | IEP | Predicted GO |
CC | GO:0043226 | organelle | IEP | Predicted GO |
CC | GO:0043227 | membrane-bounded organelle | IEP | Predicted GO |
CC | GO:0043229 | intracellular organelle | IEP | Predicted GO |
CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | Predicted GO |
BP | GO:0043603 | cellular amide metabolic process | IEP | Predicted GO |
BP | GO:0043604 | amide biosynthetic process | IEP | Predicted GO |
MF | GO:0051020 | GTPase binding | IEP | Predicted GO |
No external refs found! |