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  5. Seita.7G023000.1

Seita.7G023000.1


Description : component *(HOS15) of HDA9-PWR deacetylation complex


Gene families : OG_42_0002828 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002828_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.7G023000.1
Cluster HCAA Clusters: Cluster_107

Target Alias Description ECC score Gene Family Method Actions
Cre12.g527500 No alias WD-40 repeat family protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
CC GO:0005694 chromosome IEP Predicted GO
BP GO:0007034 vacuolar transport IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
BP GO:0016458 gene silencing IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
BP GO:0031047 gene silencing by RNA IEP Predicted GO
MF GO:0032182 ubiquitin-like protein binding IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
MF GO:0043130 ubiquitin binding IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR006594 LisH 8 33
IPR001680 WD40_repeat 202 236
IPR001680 WD40_repeat 425 470
IPR001680 WD40_repeat 303 337
IPR001680 WD40_repeat 383 420
IPR001680 WD40_repeat 257 296
IPR001680 WD40_repeat 475 513
No external refs found!