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  5. Seita.7G039900.1

Seita.7G039900.1


Description : subfamily ABCC transporter


Gene families : OG_42_0000076 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000076_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.7G039900.1
Cluster HCAA Clusters: Cluster_169

Target Alias Description ECC score Gene Family Method Actions
163772 No alias multidrug resistance-associated protein 5 0.04 Orthogroups_2024-Update
A4A49_11075 No alias abc transporter c family member 3 0.02 Orthogroups_2024-Update
At3g13100 No alias ABC transporter C family member 7... 0.04 Orthogroups_2024-Update
Brara.E02801.1 No alias subfamily ABCC transporter 0.05 Orthogroups_2024-Update
GRMZM2G081573 No alias multidrug resistance-associated protein 11 0.05 Orthogroups_2024-Update
Glyma.04G126500 No alias multidrug resistance-associated protein 2 0.04 Orthogroups_2024-Update
Potri.010G055200 No alias multidrug resistance-associated protein 3 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA 16Dec
CC GO:0016020 membrane IEA 16Dec
BP GO:0055085 transmembrane transport IEA 16Dec
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like 1319 1467
IPR003439 ABC_transporter-like 698 831
IPR011527 ABC1_TM_dom 325 590
IPR011527 ABC1_TM_dom 990 1227
No external refs found!