Seita.7G040200.1

Description : subfamily ABCC transporter

Gene families : OG_42_0000076 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000076_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria italica: Seita.7G040200.1
Cluster	HCAA Clusters: Cluster_107

Target	Alias	Description	ECC score	Gene Family Method
144775	No alias	multidrug resistance-associated protein 5	0.03	Orthogroups_2024-Update
163776	No alias	multidrug resistance-associated protein 5	0.04	Orthogroups_2024-Update
267271	No alias	multidrug resistance-associated protein 5	0.02	Orthogroups_2024-Update
402326	No alias	multidrug resistance-associated protein 5	0.03	Orthogroups_2024-Update
A4A49_11075	No alias	abc transporter c family member 3	0.03	Orthogroups_2024-Update
Brara.A03289.1	No alias	subfamily ABCC transporter	0.02	Orthogroups_2024-Update
GRMZM2G361256	No alias	multidrug resistance-associated protein 3	0.04	Orthogroups_2024-Update
Glyma.07G011500	No alias	multidrug resistance-associated protein 6	0.04	Orthogroups_2024-Update
Glyma.18G263200	No alias	multidrug resistance-associated protein 3	0.03	Orthogroups_2024-Update
HORVU2Hr1G022560.4	No alias	subfamily ABCC transporter	0.03	Orthogroups_2024-Update
Sobic.006G021900.1	No alias	subfamily ABCC transporter	0.04	Orthogroups_2024-Update
Sobic.010G169000.1	No alias	subfamily ABCC transporter	0.03	Orthogroups_2024-Update
Solyc09g064440	No alias	ABC transporter family protein (AHRD V3.3 *** A0A097P9R4_HEVBR)	0.03	Orthogroups_2024-Update
Sopen07g033520	No alias	ABC transporter	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	16Dec
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
MF	GO:0008144	drug binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
CC	GO:0016020	membrane	IEA	16Dec
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	16Dec
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000062	fatty-acyl-CoA binding	IEP	Predicted GO
BP	GO:0000375	RNA splicing, via transesterification reactions	IEP	Predicted GO
BP	GO:0000377	RNA splicing, via transesterification reactions with bulged adenosine as nucleophile	IEP	Predicted GO
BP	GO:0000398	mRNA splicing, via spliceosome	IEP	Predicted GO
MF	GO:0001882	nucleoside binding	IEP	Predicted GO
MF	GO:0001883	purine nucleoside binding	IEP	Predicted GO
MF	GO:0003824	catalytic activity	IEP	Predicted GO
MF	GO:0003924	GTPase activity	IEP	Predicted GO
MF	GO:0005096	GTPase activator activity	IEP	Predicted GO
MF	GO:0005525	GTP binding	IEP	Predicted GO
CC	GO:0005681	spliceosomal complex	IEP	Predicted GO
BP	GO:0007034	vacuolar transport	IEP	Predicted GO
MF	GO:0008047	enzyme activator activity	IEP	Predicted GO
BP	GO:0008380	RNA splicing	IEP	Predicted GO
MF	GO:0016462	pyrophosphatase activity	IEP	Predicted GO
MF	GO:0016624	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor	IEP	Predicted GO
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	IEP	Predicted GO
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	IEP	Predicted GO
MF	GO:0016887	ATPase activity	IEP	Predicted GO
MF	GO:0016903	oxidoreductase activity, acting on the aldehyde or oxo group of donors	IEP	Predicted GO
MF	GO:0017111	nucleoside-triphosphatase activity	IEP	Predicted GO
MF	GO:0019001	guanyl nucleotide binding	IEP	Predicted GO
CC	GO:0031012	extracellular matrix	IEP	Predicted GO
MF	GO:0032549	ribonucleoside binding	IEP	Predicted GO
MF	GO:0032550	purine ribonucleoside binding	IEP	Predicted GO
MF	GO:0032561	guanyl ribonucleotide binding	IEP	Predicted GO
MF	GO:0033218	amide binding	IEP	Predicted GO
CC	GO:0044421	extracellular region part	IEP	Predicted GO
MF	GO:1901567	fatty acid derivative binding	IEP	Predicted GO
MF	GO:1901681	sulfur compound binding	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR011527	ABC1_TM_dom	317	582
IPR011527	ABC1_TM_dom	968	1207
IPR003439	ABC_transporter-like	1299	1447
IPR003439	ABC_transporter-like	675	807

External Links

No external refs found!

Seita.7G040200.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation