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  5. Seita.7G058700.1

Seita.7G058700.1


Description : Unknown function


Gene families : OG_42_0000929 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000929_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.7G058700.1
Cluster HCAA Clusters: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
Bradi2g38462 No alias rna processing factor 2 0.02 Orthogroups_2024-Update
HORVU1Hr1G011160.3 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU1Hr1G011290.1 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU6Hr1G002890.6 No alias Unknown function 0.02 Orthogroups_2024-Update
LOC_Os08g01640 No alias Rf1, mitochondrial precursor, putative, expressed 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Predicted GO
BP GO:0006534 cysteine metabolic process IEP Predicted GO
BP GO:0006790 sulfur compound metabolic process IEP Predicted GO
MF GO:0009055 electron transfer activity IEP Predicted GO
BP GO:0009069 serine family amino acid metabolic process IEP Predicted GO
BP GO:0009092 homoserine metabolic process IEP Predicted GO
BP GO:0019346 transsulfuration IEP Predicted GO
MF GO:0019842 vitamin binding IEP Predicted GO
MF GO:0030170 pyridoxal phosphate binding IEP Predicted GO
BP GO:0050667 homocysteine metabolic process IEP Predicted GO
MF GO:0070279 vitamin B6 binding IEP Predicted GO
BP GO:1901605 alpha-amino acid metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 475 524
IPR002885 Pentatricopeptide_repeat 583 628
IPR002885 Pentatricopeptide_repeat 178 227
IPR002885 Pentatricopeptide_repeat 357 402
IPR002885 Pentatricopeptide_repeat 283 331
IPR002885 Pentatricopeptide_repeat 654 680
IPR002885 Pentatricopeptide_repeat 147 166
IPR002885 Pentatricopeptide_repeat 109 138
IPR002885 Pentatricopeptide_repeat 252 281
IPR002885 Pentatricopeptide_repeat 541 573
No external refs found!