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  5. Seita.7G082100.1

Seita.7G082100.1


Description : Unknown function


Gene families : OG_42_0010063 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0010063_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.7G082100.1
Cluster HCAA Clusters: Cluster_179

Target Alias Description ECC score Gene Family Method Actions
Bradi5g08500 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Orthogroups_2024-Update
Brara.F02049.1 No alias Unknown function 0.04 Orthogroups_2024-Update
GRMZM2G399877 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Orthogroups_2024-Update
Potri.012G110800 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEP Predicted GO
BP GO:0009719 response to endogenous stimulus IEP Predicted GO
BP GO:0009725 response to hormone IEP Predicted GO
BP GO:0010033 response to organic substance IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 189 236
IPR002885 Pentatricopeptide_repeat 292 322
IPR002885 Pentatricopeptide_repeat 263 290
IPR002885 Pentatricopeptide_repeat 131 154
IPR002885 Pentatricopeptide_repeat 327 355
IPR002885 Pentatricopeptide_repeat 365 392
IPR002885 Pentatricopeptide_repeat 160 186
No external refs found!