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  5. Seita.7G095500.1

Seita.7G095500.1


Description : histone *(H3)


Gene families : OG_42_0000090 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000090_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.7G095500.1
Cluster HCAA Clusters: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
103546 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
438193 No alias Histone superfamily protein 0.06 Orthogroups_2024-Update
78992 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
A4A49_56508 No alias histone h3.2 0.03 Orthogroups_2024-Update
A4A49_57080 No alias histone h3.2 0.03 Orthogroups_2024-Update
A4A49_61103 No alias histone h3.2 0.03 Orthogroups_2024-Update
Bradi2g27720 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Brara.B00354.1 No alias histone *(H3) 0.03 Orthogroups_2024-Update
Brara.B03430.1 No alias histone *(H3) 0.02 Orthogroups_2024-Update
Brara.I01745.1 No alias histone *(H3) 0.02 Orthogroups_2024-Update
Cre06.g264650 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
Cre06.g274000 No alias Histone superfamily protein 0.07 Orthogroups_2024-Update
Cre06.g276850 No alias Histone superfamily protein 0.08 Orthogroups_2024-Update
Cre12.g504650 No alias Histone superfamily protein 0.06 Orthogroups_2024-Update
Cre12.g506300 No alias Histone superfamily protein 0.05 Orthogroups_2024-Update
Cre12.g506500 No alias Histone superfamily protein 0.05 Orthogroups_2024-Update
Cre17.g708150 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Cre17.g708700 No alias Histone superfamily protein 0.04 Orthogroups_2024-Update
Cre17.g709050 No alias Histone superfamily protein 0.05 Orthogroups_2024-Update
GRMZM2G078314 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G355773 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
Glyma.05G188600 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Glyma.07G202500 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Glyma.08G245000 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
Glyma.13G173100 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
Glyma.15G032300 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
HORVU1Hr1G058490.4 No alias histone *(H3) 0.05 Orthogroups_2024-Update
HORVU2Hr1G090210.1 No alias histone *(H3) 0.03 Orthogroups_2024-Update
HORVU6Hr1G031580.1 No alias histone *(H3) 0.03 Orthogroups_2024-Update
HORVU7Hr1G025200.1 No alias histone *(H3) 0.04 Orthogroups_2024-Update
Kfl00240_g18 kfl00240_g18_v1.1 (at5g10980 : 254.0) Histone superfamily protein;... 0.01 Orthogroups_2024-Update
MA_350032g0010 No alias (at5g10980 : 266.0) Histone superfamily protein;... 0.02 Orthogroups_2024-Update
MA_561217g0010 No alias (at5g65360 : 228.0) Histone superfamily protein;... 0.03 Orthogroups_2024-Update
Mp3g07730.1 No alias histone (H3) 0.01 Orthogroups_2024-Update
Mp3g09090.1 No alias histone (H3) 0.01 Orthogroups_2024-Update
Mp7g16200.1 No alias histone (H3) 0.01 Orthogroups_2024-Update
Mp7g18030.1 No alias histone (H3) 0.02 Orthogroups_2024-Update
PSME_00017144-RA No alias (at5g10980 : 144.0) Histone superfamily protein;... 0.03 Orthogroups_2024-Update
Pp1s12_93V6 No alias histone h3 0.03 Orthogroups_2024-Update
Sobic.004G170500.2 No alias histone *(H3) 0.05 Orthogroups_2024-Update
Sobic.010G047100.1 No alias histone *(H3) 0.04 Orthogroups_2024-Update
Solyc01g095650 No alias Histone H3 like protein (AHRD V3.3 *-* Q7XIZ8_TURGL) 0.02 Orthogroups_2024-Update
Solyc02g077480 No alias Histone H3 (AHRD V3.3 *** A0A068VC55_COFCA) 0.03 Orthogroups_2024-Update
Solyc04g074580 No alias Histone H3 (AHRD V3.3 *** K7VSQ3_MAIZE) 0.03 Orthogroups_2024-Update
Solyc10g008910 No alias Histone H3 (AHRD V3.3 *** A0A068VC55_COFCA) 0.03 Orthogroups_2024-Update
Solyc12g056540 No alias Histone H3 (AHRD V3.3 *** K4DFY5_SOLLC) 0.03 Orthogroups_2024-Update
Sopen01g032420 No alias Core histone H2A/H2B/H3/H4 0.05 Orthogroups_2024-Update
Sopen01g033540 No alias Core histone H2A/H2B/H3/H4 0.07 Orthogroups_2024-Update
Sopen01g033560 No alias Core histone H2A/H2B/H3/H4 0.03 Orthogroups_2024-Update
Sopen01g033790 No alias Core histone H2A/H2B/H3/H4 0.03 Orthogroups_2024-Update
Sopen01g033830 No alias Core histone H2A/H2B/H3/H4 0.02 Orthogroups_2024-Update
Sopen02g022390 No alias Core histone H2A/H2B/H3/H4 0.03 Orthogroups_2024-Update
Sopen10g004700 No alias Core histone H2A/H2B/H3/H4 0.04 Orthogroups_2024-Update
Sopen12g029140 No alias Core histone H2A/H2B/H3/H4 0.07 Orthogroups_2024-Update
evm.model.contig_2059.6 No alias (at5g10980 : 218.0) Histone superfamily protein;... 0.02 Orthogroups_2024-Update
evm.model.contig_2255.2 No alias (at5g10980 : 218.0) Histone superfamily protein;... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA 16Dec
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Type GO Term Name Evidence Source
CC GO:0000808 origin recognition complex IEP Predicted GO
MF GO:0003774 motor activity IEP Predicted GO
MF GO:0003777 microtubule motor activity IEP Predicted GO
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP Predicted GO
CC GO:0005664 nuclear origin of replication recognition complex IEP Predicted GO
BP GO:0006260 DNA replication IEP Predicted GO
BP GO:0006928 movement of cell or subcellular component IEP Predicted GO
BP GO:0007017 microtubule-based process IEP Predicted GO
BP GO:0007018 microtubule-based movement IEP Predicted GO
MF GO:0008017 microtubule binding IEP Predicted GO
MF GO:0008092 cytoskeletal protein binding IEP Predicted GO
MF GO:0015631 tubulin binding IEP Predicted GO
MF GO:0016763 transferase activity, transferring pentosyl groups IEP Predicted GO
CC GO:0044427 chromosomal part IEP Predicted GO
CC GO:0044428 nuclear part IEP Predicted GO
CC GO:0044454 nuclear chromosome part IEP Predicted GO
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 1 132
No external refs found!