Seita.7G111400.1

Description : methylation reader Alfin of PRC1 complex

Gene families : OG_42_0000222 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000222_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria italica: Seita.7G111400.1

Target	Alias	Description	ECC score	Gene Family Method
A4A49_13353	No alias	phd finger protein alfin-like 1	0.01	Orthogroups_2024-Update
A4A49_38017	No alias	phd finger protein alfin-like 2	0.01	Orthogroups_2024-Update
Brara.B03589.1	No alias	methylation reader Alfin of PRC1 complex	0.03	Orthogroups_2024-Update
MA_10436794g0010	No alias	(at5g20510 : 248.0) AL5 encodes a member of the...	0.01	Orthogroups_2024-Update
MA_86172g0010	No alias	(at3g11200 : 155.0) AL2 encodes a member of the...	0.01	Orthogroups_2024-Update
Potri.018G050200	No alias	alfin-like 5	0.02	Orthogroups_2024-Update
Pp1s262_27V6	No alias	phd finger protein	0.03	Orthogroups_2024-Update
Seita.3G268100.1	No alias	methylation reader Alfin of PRC1 complex	0.11	Orthogroups_2024-Update
Seita.8G079500.1	No alias	methylation reader Alfin of PRC1 complex	0.01	Orthogroups_2024-Update
Sobic.002G371000.1	No alias	methylation reader Alfin of PRC1 complex	0.02	Orthogroups_2024-Update
Sobic.005G086200.1	No alias	methylation reader Alfin of PRC1 complex	0.04	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	16Dec
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0042393	histone binding	IEA	16Dec
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR019787	Znf_PHD-finger	200	250
IPR021998	Alfin	16	143

External Links

No external refs found!