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  5. Seita.7G113400.1

Seita.7G113400.1


Description : peptidyl-prolyl cis-trans isomerase *(FKBP43/53)


Gene families : OG_42_0003984 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003984_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.7G113400.1
Cluster HCAA Clusters: Cluster_45

Target Alias Description ECC score Gene Family Method Actions
A4A49_22724 No alias peptidyl-prolyl cis-trans isomerase fkbp53 0.1 Orthogroups_2024-Update
At3g12340 No alias Peptidyl-prolyl cis-trans isomerase FKBP43... 0.05 Orthogroups_2024-Update
At4g25340 No alias Peptidyl-prolyl cis-trans isomerase FKBP53... 0.06 Orthogroups_2024-Update
Bradi5g10980 No alias FK506 BINDING PROTEIN 53 0.14 Orthogroups_2024-Update
Brara.A01535.1 No alias peptidyl-prolyl cis-trans isomerase *(FKBP43/53) 0.14 Orthogroups_2024-Update
Brara.D01199.1 No alias peptidyl-prolyl cis-trans isomerase *(FKBP43/53) 0.04 Orthogroups_2024-Update
Brara.K01407.1 No alias peptidyl-prolyl cis-trans isomerase *(FKBP43/53) 0.07 Orthogroups_2024-Update
GRMZM2G024811 No alias FKBP-like peptidyl-prolyl cis-trans isomerase family protein 0.07 Orthogroups_2024-Update
Glyma.20G055800 No alias FKBP-like peptidyl-prolyl cis-trans isomerase family protein 0.04 Orthogroups_2024-Update
HORVU2Hr1G078350.3 No alias peptidyl-prolyl cis-trans isomerase *(FKBP43/53) 0.11 Orthogroups_2024-Update
LOC_Os04g36890 No alias peptidyl-prolyl cis-trans isomerase, FKBP-type,... 0.08 Orthogroups_2024-Update
Potri.007G000500 No alias FKBP-like peptidyl-prolyl cis-trans isomerase family protein 0.09 Orthogroups_2024-Update
Potri.012G129200 No alias FK506 BINDING PROTEIN 53 0.09 Orthogroups_2024-Update
Potri.015G130900 No alias FK506 BINDING PROTEIN 53 0.07 Orthogroups_2024-Update
Sobic.006G095400.1 No alias peptidyl-prolyl cis-trans isomerase *(FKBP43/53) 0.27 Orthogroups_2024-Update
Solyc03g007170 No alias Peptidyl-prolyl cis-trans isomerase FKBP53 (AHRD V3.3... 0.08 Orthogroups_2024-Update
Sopen03g003150 No alias FKBP-type peptidyl-prolyl cis-trans isomerase 0.07 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Predicted GO
MF GO:0001882 nucleoside binding IEP Predicted GO
MF GO:0001883 purine nucleoside binding IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0004645 phosphorylase activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
MF GO:0005525 GTP binding IEP Predicted GO
CC GO:0005730 nucleolus IEP Predicted GO
CC GO:0005732 small nucleolar ribonucleoprotein complex IEP Predicted GO
CC GO:0005741 mitochondrial outer membrane IEP Predicted GO
CC GO:0005759 mitochondrial matrix IEP Predicted GO
BP GO:0006139 nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0006364 rRNA processing IEP Predicted GO
BP GO:0006396 RNA processing IEP Predicted GO
BP GO:0006725 cellular aromatic compound metabolic process IEP Predicted GO
MF GO:0008134 transcription factor binding IEP Predicted GO
MF GO:0008184 glycogen phosphorylase activity IEP Predicted GO
BP GO:0009451 RNA modification IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
BP GO:0016072 rRNA metabolic process IEP Predicted GO
MF GO:0019001 guanyl nucleotide binding IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Predicted GO
CC GO:0030684 preribosome IEP Predicted GO
CC GO:0031968 organelle outer membrane IEP Predicted GO
CC GO:0031974 membrane-enclosed lumen IEP Predicted GO
CC GO:0032040 small-subunit processome IEP Predicted GO
MF GO:0032549 ribonucleoside binding IEP Predicted GO
MF GO:0032550 purine ribonucleoside binding IEP Predicted GO
MF GO:0032561 guanyl ribonucleotide binding IEP Predicted GO
CC GO:0034457 Mpp10 complex IEP Predicted GO
BP GO:0034470 ncRNA processing IEP Predicted GO
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predicted GO
BP GO:0034660 ncRNA metabolic process IEP Predicted GO
BP GO:0042254 ribosome biogenesis IEP Predicted GO
CC GO:0043233 organelle lumen IEP Predicted GO
BP GO:0044085 cellular component biogenesis IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044428 nuclear part IEP Predicted GO
CC GO:0044429 mitochondrial part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
CC GO:0044452 nucleolar part IEP Predicted GO
BP GO:0046483 heterocycle metabolic process IEP Predicted GO
CC GO:0070013 intracellular organelle lumen IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
CC GO:0098805 whole membrane IEP Predicted GO
BP GO:1901360 organic cyclic compound metabolic process IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001179 PPIase_FKBP_dom 409 497
No external refs found!