1. Home
  2. Species
  3. Setaria italica
  4. Sequence
  5. Seita.7G116200.1

Seita.7G116200.1


Description : substrate adaptor *(SKIP18) of SCF E3 ubiquitin ligase complex & regulatory protein *(FBW2) of RNA-induced silencing complex (RISC) assembly


Gene families : OG_42_0000249 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000249_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.7G116200.1
Cluster HCAA Clusters: Cluster_173

Target Alias Description ECC score Gene Family Method Actions
A4A49_00248 No alias f-box protein fbw2 0.02 Orthogroups_2024-Update
A4A49_04680 No alias putative f-boxlrr-repeat protein 23 0.02 Orthogroups_2024-Update
At4g08980 No alias FBW2 [Source:UniProtKB/TrEMBL;Acc:A0A178UUC5] 0.02 Orthogroups_2024-Update
Bradi1g61973 No alias RNI-like superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G109140 No alias F-BOX WITH WD-40 2 0.03 Orthogroups_2024-Update
GRMZM2G172904 No alias RNI-like superfamily protein 0.05 Orthogroups_2024-Update
LOC_Os06g11630 No alias OsFBX192 - F-box domain containing protein, expressed 0.02 Orthogroups_2024-Update
MA_206006g0010 No alias (at4g08980 : 242.0) Encodes an F-box gene that is a... 0.03 Orthogroups_2024-Update
Solyc08g013790 No alias F-box/LRR protein (AHRD V3.3 *-* G7I6M1_MEDTR) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004497 monooxygenase activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
MF GO:0008194 UDP-glycosyltransferase activity IEP Predicted GO
MF GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR001810 F-box_dom 154 194
No external refs found!