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  5. Seita.7G123800.1

Seita.7G123800.1


Description : Unknown function


Gene families : OG_42_0002627 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002627_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.7G123800.1
Cluster HCAA Clusters: Cluster_37

Target Alias Description ECC score Gene Family Method Actions
Bradi5g12360 No alias ATP-dependent RNA helicase, mitochondrial, putative 0.04 Orthogroups_2024-Update
Kfl00002_0180 kfl00002_0180_v1.1 (at4g14790 : 531.0) encodes a nuclear-encoded DExH box... 0.01 Orthogroups_2024-Update
evm.model.contig_2126.16 No alias (at5g39840 : 308.0) ATP-dependent RNA helicase,... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003697 single-stranded DNA binding IEP Predicted GO
MF GO:0004674 protein serine/threonine kinase activity IEP Predicted GO
MF GO:0005543 phospholipid binding IEP Predicted GO
BP GO:0006886 intracellular protein transport IEP Predicted GO
MF GO:0008173 RNA methyltransferase activity IEP Predicted GO
MF GO:0019899 enzyme binding IEP Predicted GO
MF GO:0031267 small GTPase binding IEP Predicted GO
MF GO:0032182 ubiquitin-like protein binding IEP Predicted GO
MF GO:0035091 phosphatidylinositol binding IEP Predicted GO
MF GO:0043130 ubiquitin binding IEP Predicted GO
BP GO:0046907 intracellular transport IEP Predicted GO
MF GO:0051020 GTPase binding IEP Predicted GO
BP GO:0051649 establishment of localization in cell IEP Predicted GO
InterPro domains Description Start Stop
IPR001650 Helicase_C 357 467
IPR022192 SUV3_C 613 660
No external refs found!