1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. At4g31900

At4g31900


Description : CHD3-type chromatin-remodeling factor CHR7 [Source:UniProtKB/Swiss-Prot;Acc:F4JTF6]


Gene families : OG_42_0000148 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000148_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At4g31900
Cluster HCCA clusters: Cluster_231

Target Alias Description ECC score Gene Family Method Actions
Brara.G01231.1 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os05g05230 No alias expressed protein 0.03 Orthogroups_2024-Update
PSME_00000065-RA No alias (at5g66750 : 813.0) Protein is similar to SWI2/SNF2... 0.02 Orthogroups_2024-Update
Potri.018G021100 No alias chromatin remodeling factor CHD3 (PICKLE) 0.02 Orthogroups_2024-Update
Sopen02g013810 No alias SNF2 family N-terminal domain 0.02 Orthogroups_2024-Update
evm.model.tig00000863.2 No alias (at3g54280 : 205.0) ROOT GROWTH DEFECTIVE 3 (RGD3);... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004356 glutamate-ammonia ligase activity IEP Predicted GO
MF GO:0004519 endonuclease activity IEP Predicted GO
MF GO:0004521 endoribonuclease activity IEP Predicted GO
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP Predicted GO
MF GO:0004540 ribonuclease activity IEP Predicted GO
MF GO:0005244 voltage-gated ion channel activity IEP Predicted GO
MF GO:0005247 voltage-gated chloride channel activity IEP Predicted GO
MF GO:0005253 anion channel activity IEP Predicted GO
MF GO:0005254 chloride channel activity IEP Predicted GO
BP GO:0006541 glutamine metabolic process IEP Predicted GO
BP GO:0006542 glutamine biosynthetic process IEP Predicted GO
BP GO:0006821 chloride transport IEP Predicted GO
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Predicted GO
MF GO:0008308 voltage-gated anion channel activity IEP Predicted GO
BP GO:0009064 glutamine family amino acid metabolic process IEP Predicted GO
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Predicted GO
MF GO:0015108 chloride transmembrane transporter activity IEP Predicted GO
MF GO:0016211 ammonia ligase activity IEP Predicted GO
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP Predicted GO
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Predicted GO
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Predicted GO
MF GO:0022832 voltage-gated channel activity IEP Predicted GO
CC GO:0030127 COPII vesicle coat IEP Predicted GO
MF GO:0140098 catalytic activity, acting on RNA IEP Predicted GO
InterPro domains Description Start Stop
IPR009462 DUF1086 856 998
IPR001650 Helicase_C 525 638
IPR000330 SNF2_N 242 501
IPR023780 Chromo_domain 46 102
IPR023780 Chromo_domain 143 191
IPR009463 DUF1087 761 814
No external refs found!