At4g31980

Description : PPPDE thiol peptidase family protein [Source:UniProtKB/TrEMBL;Acc:O49393]

Gene families : OG_42_0000095 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000095_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Arabidopsis release: At4g31980
Cluster	HCCA clusters: Cluster_156

Target	Alias	Description	ECC score	Gene Family Method
Bradi4g16901	No alias	Plant protein of unknown function (DUF247)	0.03	Orthogroups_2024-Update
Bradi4g16920	No alias	Plant protein of unknown function (DUF247)	0.02	Orthogroups_2024-Update
Glyma.07G147200	No alias	Plant protein of unknown function (DUF247)	0.03	Orthogroups_2024-Update
Glyma.16G161000	No alias	Plant protein of unknown function (DUF247)	0.03	Orthogroups_2024-Update
HORVU7Hr1G089850.3	No alias	Unknown function	0.03	Orthogroups_2024-Update
LOC_Os05g10900	No alias	plant protein of unknown function domain containing...	0.03	Orthogroups_2024-Update
MA_10425807g0020	No alias	no hits & (original description: no original description)	0.03	Orthogroups_2024-Update
MA_10428282g0010	No alias	(at3g50170 : 135.0) Plant protein of unknown function...	0.02	Orthogroups_2024-Update
MA_109716g0010	No alias	(at3g50170 : 195.0) Plant protein of unknown function...	0.02	Orthogroups_2024-Update
MA_749769g0010	No alias	(at3g50120 : 80.9) Plant protein of unknown function...	0.03	Orthogroups_2024-Update
PSME_00029264-RA	No alias	(at3g50130 : 92.4) Plant protein of unknown function...	0.04	Orthogroups_2024-Update
Potri.001G017900	No alias	Function unknown	0.04	Orthogroups_2024-Update
Potri.001G071300	No alias	Plant protein of unknown function (DUF247)	0.03	Orthogroups_2024-Update
Potri.003G206500	No alias	Function unknown	0.04	Orthogroups_2024-Update
Potri.016G039500	No alias	Plant protein of unknown function (DUF247)	0.02	Orthogroups_2024-Update
Potri.T138400	No alias	Plant protein of unknown function (DUF247)	0.03	Orthogroups_2024-Update
Seita.1G014800.1	No alias	Unknown function	0.04	Orthogroups_2024-Update
Sobic.005G051600.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Sobic.005G141200.1	No alias	Unknown function	0.04	Orthogroups_2024-Update
Sobic.006G139600.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Solyc01g057260	No alias	transmembrane protein, putative (DUF247) (AHRD V3.3 -...	0.03	Orthogroups_2024-Update
Solyc04g008910	No alias	transmembrane protein, putative (DUF247) (AHRD V3.3 ***...	0.03	Orthogroups_2024-Update
Solyc04g016030	No alias	transmembrane protein, putative (DUF247) (AHRD V3.3 -...	0.03	Orthogroups_2024-Update
Solyc10g079520	No alias	LOW QUALITY:transmembrane protein, putative (DUF247)...	0.03	Orthogroups_2024-Update
Sopen04g004110	No alias	Plant protein of unknown function	0.02	Orthogroups_2024-Update
Sopen04g008100	No alias	Plant protein of unknown function	0.03	Orthogroups_2024-Update
Sopen10g030170	No alias	Plant protein of unknown function	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

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Type	GO Term	Name	Evidence	Source
BP	GO:0000041	transition metal ion transport	IEP	Predicted GO
BP	GO:0001522	pseudouridine synthesis	IEP	Predicted GO
MF	GO:0003993	acid phosphatase activity	IEP	Predicted GO
MF	GO:0004126	cytidine deaminase activity	IEP	Predicted GO
MF	GO:0005375	copper ion transmembrane transporter activity	IEP	Predicted GO
BP	GO:0006213	pyrimidine nucleoside metabolic process	IEP	Predicted GO
BP	GO:0006216	cytidine catabolic process	IEP	Predicted GO
BP	GO:0006825	copper ion transport	IEP	Predicted GO
MF	GO:0008324	cation transmembrane transporter activity	IEP	Predicted GO
BP	GO:0008612	peptidyl-lysine modification to peptidyl-hypusine	IEP	Predicted GO
BP	GO:0009119	ribonucleoside metabolic process	IEP	Predicted GO
BP	GO:0009164	nucleoside catabolic process	IEP	Predicted GO
BP	GO:0009972	cytidine deamination	IEP	Predicted GO
MF	GO:0009982	pseudouridine synthase activity	IEP	Predicted GO
MF	GO:0015095	magnesium ion transmembrane transporter activity	IEP	Predicted GO
BP	GO:0015693	magnesium ion transport	IEP	Predicted GO
BP	GO:0016226	iron-sulfur cluster assembly	IEP	Predicted GO
MF	GO:0016814	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines	IEP	Predicted GO
BP	GO:0018205	peptidyl-lysine modification	IEP	Predicted GO
MF	GO:0019239	deaminase activity	IEP	Predicted GO
MF	GO:0022890	inorganic cation transmembrane transporter activity	IEP	Predicted GO
BP	GO:0030001	metal ion transport	IEP	Predicted GO
BP	GO:0031163	metallo-sulfur cluster assembly	IEP	Predicted GO
BP	GO:0034656	nucleobase-containing small molecule catabolic process	IEP	Predicted GO
BP	GO:0035434	copper ion transmembrane transport	IEP	Predicted GO
BP	GO:0042454	ribonucleoside catabolic process	IEP	Predicted GO
MF	GO:0043169	cation binding	IEP	Predicted GO
BP	GO:0044248	cellular catabolic process	IEP	Predicted GO
BP	GO:0046087	cytidine metabolic process	IEP	Predicted GO
BP	GO:0046131	pyrimidine ribonucleoside metabolic process	IEP	Predicted GO
BP	GO:0046133	pyrimidine ribonucleoside catabolic process	IEP	Predicted GO
BP	GO:0046135	pyrimidine nucleoside catabolic process	IEP	Predicted GO
MF	GO:0046872	metal ion binding	IEP	Predicted GO
MF	GO:0046873	metal ion transmembrane transporter activity	IEP	Predicted GO
MF	GO:0046915	transition metal ion transmembrane transporter activity	IEP	Predicted GO
BP	GO:0051604	protein maturation	IEP	Predicted GO
BP	GO:0070838	divalent metal ion transport	IEP	Predicted GO
BP	GO:0072511	divalent inorganic cation transport	IEP	Predicted GO
BP	GO:0072527	pyrimidine-containing compound metabolic process	IEP	Predicted GO
BP	GO:0072529	pyrimidine-containing compound catabolic process	IEP	Predicted GO
BP	GO:1901658	glycosyl compound catabolic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR004158	DUF247_pln	295	668
IPR008580	PPPDE_dom	18	151

External Links

No external refs found!

At4g31980

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation