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  5. Seita.7G136000.1

Seita.7G136000.1


Description : substrate adaptor of SCF E3 ubiquitin ligase complex


Gene families : OG_42_0006559 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006559_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.7G136000.1
Cluster HCAA Clusters: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
Solyc05g013410 No alias F-box family protein (AHRD V3.3 *** AT1G70590.1) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004619 phosphoglycerate mutase activity IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0005996 monosaccharide metabolic process IEP Predicted GO
BP GO:0006006 glucose metabolic process IEP Predicted GO
BP GO:0006007 glucose catabolic process IEP Predicted GO
BP GO:0009966 regulation of signal transduction IEP Predicted GO
BP GO:0010646 regulation of cell communication IEP Predicted GO
BP GO:0016052 carbohydrate catabolic process IEP Predicted GO
MF GO:0016866 intramolecular transferase activity IEP Predicted GO
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Predicted GO
BP GO:0019318 hexose metabolic process IEP Predicted GO
BP GO:0019320 hexose catabolic process IEP Predicted GO
BP GO:0023051 regulation of signaling IEP Predicted GO
MF GO:0030145 manganese ion binding IEP Predicted GO
BP GO:0044282 small molecule catabolic process IEP Predicted GO
BP GO:0046365 monosaccharide catabolic process IEP Predicted GO
BP GO:0048583 regulation of response to stimulus IEP Predicted GO
InterPro domains Description Start Stop
IPR006597 Sel1-like 181 213
IPR006597 Sel1-like 132 147
IPR006597 Sel1-like 160 179
IPR006597 Sel1-like 251 285
IPR006597 Sel1-like 214 249
No external refs found!