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  5. Seita.7G149800.1

Seita.7G149800.1


Description : BBX class-IV transcription factor


Gene families : OG_42_0004508 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004508_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.7G149800.1
Cluster HCAA Clusters: Cluster_35

Target Alias Description ECC score Gene Family Method Actions
271535 No alias light-regulated zinc finger protein 1 0.03 Orthogroups_2024-Update
At1g06040 No alias B-box zinc finger protein 24... 0.03 Orthogroups_2024-Update
Brara.H02976.1 No alias BBX class-IV transcription factor 0.04 Orthogroups_2024-Update
Brara.I05427.1 No alias BBX class-IV transcription factor 0.03 Orthogroups_2024-Update
Brara.J00413.1 No alias BBX class-IV transcription factor 0.03 Orthogroups_2024-Update
GRMZM2G018876 No alias B-box zinc finger family protein 0.03 Orthogroups_2024-Update
Glyma.11G127100 No alias B-box zinc finger family protein 0.05 Orthogroups_2024-Update
Glyma.12G051700 No alias B-box zinc finger family protein 0.06 Orthogroups_2024-Update
Glyma.15G029500 No alias B-box zinc finger family protein 0.05 Orthogroups_2024-Update
Potri.017G028300 No alias B-box zinc finger family protein 0.02 Orthogroups_2024-Update
Pp1s509_13V6 No alias zinc finger 0.05 Orthogroups_2024-Update
Sobic.006G131800.1 No alias BBX class-IV transcription factor 0.08 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Predicted GO
BP GO:0000160 phosphorelay signal transduction system IEP Predicted GO
BP GO:0000272 polysaccharide catabolic process IEP Predicted GO
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0005375 copper ion transmembrane transporter activity IEP Predicted GO
BP GO:0006825 copper ion transport IEP Predicted GO
MF GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity IEP Predicted GO
MF GO:0016161 beta-amylase activity IEP Predicted GO
MF GO:0016830 carbon-carbon lyase activity IEP Predicted GO
MF GO:0019842 vitamin binding IEP Predicted GO
MF GO:0030151 molybdenum ion binding IEP Predicted GO
MF GO:0030170 pyridoxal phosphate binding IEP Predicted GO
BP GO:0035434 copper ion transmembrane transport IEP Predicted GO
BP GO:0035556 intracellular signal transduction IEP Predicted GO
MF GO:0043531 ADP binding IEP Predicted GO
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP Predicted GO
MF GO:0070279 vitamin B6 binding IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
InterPro domains Description Start Stop
IPR000315 Znf_B-box 4 47
IPR000315 Znf_B-box 56 97
No external refs found!