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  5. Seita.7G150200.1

Seita.7G150200.1


Description : Unknown function


Gene families : OG_42_0000525 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000525_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.7G150200.1
Cluster HCAA Clusters: Cluster_142

Target Alias Description ECC score Gene Family Method Actions
PSME_00037636-RA No alias (p29022|chia_maize : 228.0) Endochitinase A precursor... 0.03 Orthogroups_2024-Update
PSME_00039570-RA No alias (p29023|chib_maize : 253.0) Endochitinase B precursor... 0.03 Orthogroups_2024-Update
PSME_00046775-RA No alias (at3g54420 : 171.0) encodes an EP3 chitinase that is... 0.04 Orthogroups_2024-Update
PSME_00050706-RA No alias (p29022|chia_maize : 237.0) Endochitinase A precursor... 0.03 Orthogroups_2024-Update
Potri.019G093800 No alias homolog of carrot EP3-3 chitinase 0.03 Orthogroups_2024-Update
Seita.1G225300.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.006G132400.1 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004568 chitinase activity IEA 16Dec
BP GO:0006032 chitin catabolic process IEA 16Dec
BP GO:0016998 cell wall macromolecule catabolic process IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0008171 O-methyltransferase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR000726 Glyco_hydro_19_cat 40 182
IPR000726 Glyco_hydro_19_cat 189 236
No external refs found!