Seita.7G169600.1


Description : ARF-type transcription factor


Gene families : OG_42_0000050 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000050_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.7G169600.1
Cluster HCAA Clusters: Cluster_252

Target Alias Description ECC score Gene Family Method Actions
AC207656.3_FG002 No alias auxin response factor 16 0.03 Orthogroups_2024-Update
At3g61830 No alias Auxin response factor 18 [Source:UniProtKB/Swiss-Prot;Acc:Q9C5W9] 0.03 Orthogroups_2024-Update
Brara.I00250.1 No alias ARF-type transcription factor 0.02 Orthogroups_2024-Update
GRMZM5G808366 No alias auxin response factor 17 0.02 Orthogroups_2024-Update
Glyma.01G002100 No alias Transcriptional factor B3 family protein /... 0.03 Orthogroups_2024-Update
Glyma.13G112600 No alias Transcriptional factor B3 family protein /... 0.04 Orthogroups_2024-Update
Glyma.17G047100 No alias Transcriptional factor B3 family protein /... 0.03 Orthogroups_2024-Update
HORVU5Hr1G009650.20 No alias ARF-type transcription factor 0.03 Orthogroups_2024-Update
HORVU5Hr1G054640.1 No alias ARF-type transcription factor 0.03 Orthogroups_2024-Update
HORVU6Hr1G070410.1 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os04g36054 No alias auxin response factor 9, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os06g09660 No alias auxin response factor, putative, expressed 0.03 Orthogroups_2024-Update
Potri.005G207700 No alias auxin response factor 8 0.02 Orthogroups_2024-Update
Pp1s339_42V6 No alias auxin response 0.02 Orthogroups_2024-Update
Seita.1G195500.1 No alias ARF-type transcription factor 0.03 Orthogroups_2024-Update
Seita.4G257800.1 No alias ARF-type transcription factor 0.03 Orthogroups_2024-Update
Seita.7G108100.1 No alias ARF-type transcription factor 0.03 Orthogroups_2024-Update
Seita.8G135700.1 No alias ARF-type transcription factor 0.04 Orthogroups_2024-Update
Sobic.010G073600.1 No alias ARF-type transcription factor & auxin signal mediator... 0.03 Orthogroups_2024-Update
Solyc01g103050 No alias Auxin Response Factor 1 0.03 Orthogroups_2024-Update
Sopen02g022450 No alias Auxin response factor 0.02 Orthogroups_2024-Update
Sopen06g031560 No alias Auxin response factor 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA 16Dec
CC GO:0005634 nucleus IEA 16Dec
BP GO:0006355 regulation of transcription, DNA-templated IEA 16Dec
BP GO:0009725 response to hormone IEA 16Dec
Type GO Term Name Evidence Source
MF GO:0003873 6-phosphofructo-2-kinase activity IEP Predicted GO
MF GO:0004869 cysteine-type endopeptidase inhibitor activity IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0005996 monosaccharide metabolic process IEP Predicted GO
BP GO:0006000 fructose metabolic process IEP Predicted GO
MF GO:0008373 sialyltransferase activity IEP Predicted GO
MF GO:0008443 phosphofructokinase activity IEP Predicted GO
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
MF GO:0019200 carbohydrate kinase activity IEP Predicted GO
BP GO:0019318 hexose metabolic process IEP Predicted GO
MF GO:0030246 carbohydrate binding IEP Predicted GO
MF GO:0032182 ubiquitin-like protein binding IEP Predicted GO
MF GO:0043130 ubiquitin binding IEP Predicted GO
BP GO:0044238 primary metabolic process IEP Predicted GO
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP Predicted GO
BP GO:0071704 organic substance metabolic process IEP Predicted GO
MF GO:2001070 starch binding IEP Predicted GO
InterPro domains Description Start Stop
IPR010525 Auxin_resp 306 389
IPR003340 B3_DNA-bd 156 257
No external refs found!