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  5. Seita.7G172900.1

Seita.7G172900.1


Description : iron chelator transporter *(YSL) & ferric cation-chelator transporter *(YSL)


Gene families : OG_42_0000320 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000320_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.7G172900.1
Cluster HCAA Clusters: Cluster_72

Target Alias Description ECC score Gene Family Method Actions
269976 No alias YELLOW STRIPE like 6 0.03 Orthogroups_2024-Update
At1g48370 No alias Probable metal-nicotianamine transporter YSL8... 0.02 Orthogroups_2024-Update
Bradi5g17230 No alias YELLOW STRIPE like 2 0.02 Orthogroups_2024-Update
Brara.D01240.1 No alias iron chelator transporter *(YSL) & ferric... 0.03 Orthogroups_2024-Update
Brara.I00272.1 No alias iron chelator transporter *(YSL) & ferric... 0.02 Orthogroups_2024-Update
HORVU2Hr1G092810.4 No alias iron chelator transporter *(YSL) & ferric... 0.02 Orthogroups_2024-Update
HORVU2Hr1G120250.1 No alias iron chelator transporter *(YSL) & ferric... 0.03 Orthogroups_2024-Update
HORVU7Hr1G097350.1 No alias iron chelator transporter *(YSL) & ferric... 0.02 Orthogroups_2024-Update
LOC_Os04g44320 No alias transposon protein, putative, unclassified, expressed 0.03 Orthogroups_2024-Update
LOC_Os04g45900 No alias transposon protein, putative, unclassified, expressed 0.02 Orthogroups_2024-Update
PSME_00004865-RA No alias (at1g65730 : 848.0) Arabidopsis thaliana... 0.03 Orthogroups_2024-Update
PSME_00019280-RA No alias (at5g53550 : 798.0) YELLOW STRIPE like 3 (YSL3);... 0.05 Orthogroups_2024-Update
PSME_00021866-RA No alias (at3g27020 : 523.0) Arabidopsis thaliana... 0.03 Orthogroups_2024-Update
PSME_00036873-RA No alias (at1g65730 : 901.0) Arabidopsis thaliana... 0.03 Orthogroups_2024-Update
Pp1s2_335V6 No alias oligopeptide transporter opt family 0.02 Orthogroups_2024-Update
Seita.1G244400.1 No alias iron chelator transporter *(YSL) & ferric... 0.03 Orthogroups_2024-Update
Seita.7G075900.1 No alias iron chelator transporter *(YSL) & ferric... 0.02 Orthogroups_2024-Update
Sobic.006G152700.2 No alias iron chelator transporter *(YSL) & ferric... 0.04 Orthogroups_2024-Update
Solyc03g031920 No alias Oligopeptide transporter, putative (AHRD V3.3 *** B9SIR4_RICCO) 0.04 Orthogroups_2024-Update
Solyc03g082620 No alias Yellow stripe 1A transporter (AHRD V3.3 *** A0A0K9P9K5_ZOSMR) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0035673 oligopeptide transmembrane transporter activity IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0004126 cytidine deaminase activity IEP Predicted GO
MF GO:0005507 copper ion binding IEP Predicted GO
BP GO:0006213 pyrimidine nucleoside metabolic process IEP Predicted GO
BP GO:0006216 cytidine catabolic process IEP Predicted GO
BP GO:0009116 nucleoside metabolic process IEP Predicted GO
BP GO:0009119 ribonucleoside metabolic process IEP Predicted GO
BP GO:0009164 nucleoside catabolic process IEP Predicted GO
BP GO:0009972 cytidine deamination IEP Predicted GO
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Predicted GO
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Predicted GO
MF GO:0019239 deaminase activity IEP Predicted GO
BP GO:0019439 aromatic compound catabolic process IEP Predicted GO
BP GO:0034655 nucleobase-containing compound catabolic process IEP Predicted GO
BP GO:0034656 nucleobase-containing small molecule catabolic process IEP Predicted GO
BP GO:0042454 ribonucleoside catabolic process IEP Predicted GO
BP GO:0044270 cellular nitrogen compound catabolic process IEP Predicted GO
BP GO:0044282 small molecule catabolic process IEP Predicted GO
BP GO:0046087 cytidine metabolic process IEP Predicted GO
BP GO:0046131 pyrimidine ribonucleoside metabolic process IEP Predicted GO
BP GO:0046133 pyrimidine ribonucleoside catabolic process IEP Predicted GO
BP GO:0046135 pyrimidine nucleoside catabolic process IEP Predicted GO
BP GO:0046700 heterocycle catabolic process IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Predicted GO
BP GO:0072529 pyrimidine-containing compound catabolic process IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1901136 carbohydrate derivative catabolic process IEP Predicted GO
BP GO:1901361 organic cyclic compound catabolic process IEP Predicted GO
BP GO:1901565 organonitrogen compound catabolic process IEP Predicted GO
BP GO:1901657 glycosyl compound metabolic process IEP Predicted GO
BP GO:1901658 glycosyl compound catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR004813 OPT 65 684
No external refs found!