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  5. Seita.7G199700.1

Seita.7G199700.1


Description : RKD-type transcription factor & germ cell differentiation factor *(RKD)


Gene families : OG_42_0000310 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000310_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.7G199700.1
Cluster HCAA Clusters: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
Bradi3g59420 No alias RWP-RK domain-containing protein 0.03 Orthogroups_2024-Update
HORVU6Hr1G075870.2 No alias germ cell differentiation factor *(RKD) & RKD-type... 0.02 Orthogroups_2024-Update
Kfl00791_0010 kfl00791_0010_v1.1 (at5g66990 : 105.0) RWP-RK domain-containing protein;... 0.03 Orthogroups_2024-Update
evm.model.tig00001304.5 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004843 thiol-dependent ubiquitin-specific protease activity IEP Predicted GO
BP GO:0016579 protein deubiquitination IEP Predicted GO
MF GO:0016779 nucleotidyltransferase activity IEP Predicted GO
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Predicted GO
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Predicted GO
BP GO:0070646 protein modification by small protein removal IEP Predicted GO
BP GO:0070647 protein modification by small protein conjugation or removal IEP Predicted GO
MF GO:0101005 ubiquitinyl hydrolase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR003035 RWP-RK_dom 204 252
No external refs found!