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  5. Seita.7G201100.1

Seita.7G201100.1


Description : miRNA recruiting factor (AGO) of RNA-induced silencing complex (RISC) assembly


Gene families : OG_42_0000134 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000134_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.7G201100.1
Cluster HCAA Clusters: Cluster_13

Target Alias Description ECC score Gene Family Method Actions
AC199001.3_FG005 No alias Stabilizer of iron transporter SufD / Polynucleotidyl transferase 0.03 Orthogroups_2024-Update
At2g27880 No alias Protein argonaute 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJK3] 0.03 Orthogroups_2024-Update
Brara.E01925.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.J01530.1 No alias siRNA-integrating factor *(AGO) 0.03 Orthogroups_2024-Update
LOC_Os03g47820 No alias PINHEAD, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os03g47830 No alias argonaute, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os06g39640 No alias PINHEAD, putative, expressed 0.04 Orthogroups_2024-Update
Potri.001G213700 No alias Argonaute family protein 0.03 Orthogroups_2024-Update
Potri.014G159400 No alias Argonaute family protein 0.03 Orthogroups_2024-Update
Potri.015G029000 No alias Stabilizer of iron transporter SufD / Polynucleotidyl transferase 0.02 Orthogroups_2024-Update
Pp1s110_124V6 No alias argonaute protein group 0.02 Orthogroups_2024-Update
Sobic.010G180800.2 No alias miRNA recruiting factor (AGO) of RNA-induced silencing... 0.03 Orthogroups_2024-Update
Solyc02g069270 No alias Argonaute 2b 0.03 Orthogroups_2024-Update
Solyc03g111760 No alias Argonaute15 0.04 Orthogroups_2024-Update
Solyc12g006790 No alias Argonaute10b 0.03 Orthogroups_2024-Update
Sopen02g018440 No alias Piwi domain 0.03 Orthogroups_2024-Update
Sopen03g028990 No alias Piwi domain 0.04 Orthogroups_2024-Update
Sopen06g029900 No alias Piwi domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA 16Dec
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003887 DNA-directed DNA polymerase activity IEP Predicted GO
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0005984 disaccharide metabolic process IEP Predicted GO
BP GO:0005991 trehalose metabolic process IEP Predicted GO
BP GO:0005992 trehalose biosynthetic process IEP Predicted GO
BP GO:0009058 biosynthetic process IEP Predicted GO
BP GO:0009311 oligosaccharide metabolic process IEP Predicted GO
BP GO:0009312 oligosaccharide biosynthetic process IEP Predicted GO
BP GO:0016051 carbohydrate biosynthetic process IEP Predicted GO
BP GO:0016579 protein deubiquitination IEP Predicted GO
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
MF GO:0016846 carbon-sulfur lyase activity IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
MF GO:0034061 DNA polymerase activity IEP Predicted GO
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Predicted GO
BP GO:0044262 cellular carbohydrate metabolic process IEP Predicted GO
BP GO:0046351 disaccharide biosynthetic process IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
BP GO:0070646 protein modification by small protein removal IEP Predicted GO
InterPro domains Description Start Stop
IPR014811 ArgoL1 392 442
IPR032472 ArgoL2 584 630
IPR003165 Piwi 735 1054
IPR032474 Argonaute_N 244 382
IPR032473 Argonaute_Mid_dom 641 715
IPR024357 Argonaut_Gly-rich 124 225
IPR003100 PAZ_dom 470 574
No external refs found!