Seita.7G202300.1

Description : transcription factor *(DOF)

Gene families : OG_42_0000027 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000027_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria italica: Seita.7G202300.1
Cluster	HCAA Clusters: Cluster_55

Target	Alias	Description	ECC score	Gene Family Method
A4A49_15151	No alias	dof zinc finger protein dof2.4	0.06	Orthogroups_2024-Update
A4A49_20554	No alias	dof zinc finger protein dof2.1	0.04	Orthogroups_2024-Update
A4A49_35213	No alias	dof zinc finger protein dof1.7	0.03	Orthogroups_2024-Update
At5g62940	No alias	HCA2 [Source:UniProtKB/TrEMBL;Acc:A0A178UF22]	0.03	Orthogroups_2024-Update
Bradi1g26570	No alias	TARGET OF MONOPTEROS 6	0.03	Orthogroups_2024-Update
Bradi3g56380	No alias	OBF binding protein 4	0.02	Orthogroups_2024-Update
Bradi5g26240	No alias	Dof-type zinc finger DNA-binding family protein	0.03	Orthogroups_2024-Update
Glyma.04G233300	No alias	Dof-type zinc finger DNA-binding family protein	0.03	Orthogroups_2024-Update
Glyma.15G022800	No alias	DOF zinc finger protein 1	0.08	Orthogroups_2024-Update
Glyma.18G176300	No alias	DNA binding with one finger 2.4	0.05	Orthogroups_2024-Update
Pp1s199_87V6	No alias	cycling dof factor 2	0.02	Orthogroups_2024-Update
Seita.5G324400.1	No alias	transcription factor *(DOF)	0.05	Orthogroups_2024-Update
Sobic.002G313800.1	No alias	transcription factor *(DOF)	0.04	Orthogroups_2024-Update
Solyc10g009360	No alias	Dof zinc finger protein (AHRD V3.3 *** W9RTF5_9ROSA)	0.03	Orthogroups_2024-Update
Sopen05g032990	No alias	Dof domain, zinc finger	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	16Dec
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	16Dec
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003690	double-stranded DNA binding	IEP	Predicted GO
MF	GO:0003697	single-stranded DNA binding	IEP	Predicted GO
BP	GO:0006813	potassium ion transport	IEP	Predicted GO
BP	GO:0006952	defense response	IEP	Predicted GO
MF	GO:0015077	monovalent inorganic cation transmembrane transporter activity	IEP	Predicted GO
MF	GO:0015079	potassium ion transmembrane transporter activity	IEP	Predicted GO
BP	GO:0015672	monovalent inorganic cation transport	IEP	Predicted GO
BP	GO:0030001	metal ion transport	IEP	Predicted GO
BP	GO:0034220	ion transmembrane transport	IEP	Predicted GO
MF	GO:0046873	metal ion transmembrane transporter activity	IEP	Predicted GO
BP	GO:0071805	potassium ion transmembrane transport	IEP	Predicted GO
BP	GO:0098655	cation transmembrane transport	IEP	Predicted GO
BP	GO:0098660	inorganic ion transmembrane transport	IEP	Predicted GO
BP	GO:0098662	inorganic cation transmembrane transport	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003851	Znf_Dof	92	148

External Links

No external refs found!