Description : Unknown function
Gene families : OG_42_0000001 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Setaria italica: Seita.7G205600.1 | |
Cluster | HCAA Clusters: Cluster_28 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
424099 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | Orthogroups_2024-Update | |
462 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
At2g01510 | No alias | Pentatricopeptide repeat-containing protein At2g01510,... | 0.02 | Orthogroups_2024-Update | |
At3g29230 | No alias | Pentatricopeptide repeat-containing protein At3g29230... | 0.03 | Orthogroups_2024-Update | |
Bradi1g47170 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | Orthogroups_2024-Update | |
Bradi1g59070 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
Bradi2g22840 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.04 | Orthogroups_2024-Update | |
Bradi2g42710 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | Orthogroups_2024-Update | |
Bradi2g45110 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.04 | Orthogroups_2024-Update | |
Bradi3g47510 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
Bradi3g49340 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
Bradi3g55520 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
Brara.A01120.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
Brara.F01240.1 | No alias | RNA editing factor *(CWM1) | 0.03 | Orthogroups_2024-Update | |
Brara.F03378.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
Brara.G02157.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
GRMZM2G165521 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
Glyma.02G144100 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
Glyma.07G159200 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
Glyma.08G213800 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | Orthogroups_2024-Update | |
Glyma.12G102800 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.04 | Orthogroups_2024-Update | |
HORVU0Hr1G007880.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
HORVU5Hr1G047290.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
LOC_Os01g72930 | No alias | pentatricopeptide, putative, expressed | 0.03 | Orthogroups_2024-Update | |
LOC_Os03g27880 | No alias | tetratricopeptide-like helical, putative, expressed | 0.03 | Orthogroups_2024-Update | |
LOC_Os03g60200 | No alias | pentatricopeptide, putative, expressed | 0.02 | Orthogroups_2024-Update | |
MA_14938g0010 | No alias | (at2g22070 : 608.0) pentatricopeptide (PPR)... | 0.02 | Orthogroups_2024-Update | |
MA_22485g0010 | No alias | (at3g46790 : 552.0) Encodes a member of a PCMP (plant... | 0.03 | Orthogroups_2024-Update | |
MA_6329g0010 | No alias | (at4g02750 : 542.0) Tetratricopeptide repeat (TPR)-like... | 0.02 | Orthogroups_2024-Update | |
MA_656915g0010 | No alias | (at4g18750 : 657.0) Encodes a pentatricopeptide (PPR)... | 0.02 | Orthogroups_2024-Update | |
MA_658463g0010 | No alias | (at4g02750 : 623.0) Tetratricopeptide repeat (TPR)-like... | 0.02 | Orthogroups_2024-Update | |
MA_9360929g0010 | No alias | (at4g13650 : 669.0) Pentatricopeptide repeat (PPR)... | 0.02 | Orthogroups_2024-Update | |
PSME_00007759-RA | No alias | (at3g12770 : 656.0) Encodes a pentatricopeptide repeat... | 0.03 | Orthogroups_2024-Update | |
PSME_00008509-RA | No alias | (at1g11290 : 604.0) Pentatricopeptide Repeat Protein... | 0.03 | Orthogroups_2024-Update | |
PSME_00022741-RA | No alias | (at4g18750 : 598.0) Encodes a pentatricopeptide (PPR)... | 0.02 | Orthogroups_2024-Update | |
PSME_00024580-RA | No alias | (at4g02750 : 440.0) Tetratricopeptide repeat (TPR)-like... | 0.02 | Orthogroups_2024-Update | |
PSME_00032959-RA | No alias | (at3g46790 : 529.0) Encodes a member of a PCMP (plant... | 0.03 | Orthogroups_2024-Update | |
PSME_00056168-RA | No alias | (at3g61170 : 686.0) Tetratricopeptide repeat (TPR)-like... | 0.03 | Orthogroups_2024-Update | |
PSME_00056424-RA | No alias | (at2g22070 : 461.0) pentatricopeptide (PPR)... | 0.02 | Orthogroups_2024-Update | |
Potri.001G066100 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | Orthogroups_2024-Update | |
Potri.002G239600 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
Potri.003G031600 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | Orthogroups_2024-Update | |
Potri.004G124400 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
Potri.007G050200 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
Potri.018G040100 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
Seita.1G311600.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
Sobic.001G001200.1 | No alias | Unknown function | 0.05 | Orthogroups_2024-Update | |
Sobic.001G009400.1 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
Sobic.001G069300.2 | No alias | RNA editing factor *(DEK36) | 0.05 | Orthogroups_2024-Update | |
Sobic.001G149100.1 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
Sobic.001G151300.1 | No alias | Unknown function | 0.06 | Orthogroups_2024-Update | |
Sobic.001G212200.1 | No alias | Unknown function | 0.06 | Orthogroups_2024-Update | |
Sobic.001G312700.1 | No alias | RNA editing factor *(MEF25) | 0.05 | Orthogroups_2024-Update | |
Sobic.001G347100.2 | No alias | Unknown function | 0.05 | Orthogroups_2024-Update | |
Sobic.001G436600.3 | No alias | Unknown function | 0.05 | Orthogroups_2024-Update | |
Sobic.002G084400.1 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
Sobic.002G111700.6 | No alias | Unknown function | 0.05 | Orthogroups_2024-Update | |
Sobic.002G172500.3 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
Sobic.002G200500.3 | No alias | Unknown function | 0.07 | Orthogroups_2024-Update | |
Sobic.002G240900.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
Sobic.002G292300.2 | No alias | Unknown function | 0.05 | Orthogroups_2024-Update | |
Sobic.002G358900.3 | No alias | RNA editing factor *(OTP90) | 0.04 | Orthogroups_2024-Update | |
Sobic.002G384800.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
Sobic.002G389200.2 | No alias | Unknown function | 0.06 | Orthogroups_2024-Update | |
Sobic.003G030100.1 | No alias | RNA editing factor *(CWM1) | 0.03 | Orthogroups_2024-Update | |
Sobic.003G119100.1 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
Sobic.003G237100.2 | No alias | Unknown function | 0.05 | Orthogroups_2024-Update | |
Sobic.003G277100.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
Sobic.003G337200.1 | No alias | RNA editing factor *(MEF10) | 0.05 | Orthogroups_2024-Update | |
Sobic.004G051600.1 | No alias | Unknown function | 0.06 | Orthogroups_2024-Update | |
Sobic.004G053100.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
Sobic.004G199400.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
Sobic.004G217900.2 | No alias | Unknown function | 0.06 | Orthogroups_2024-Update | |
Sobic.004G266300.1 | No alias | Unknown function | 0.06 | Orthogroups_2024-Update | |
Sobic.004G290400.1 | No alias | Unknown function | 0.05 | Orthogroups_2024-Update | |
Sobic.004G312000.1 | No alias | RNA editing factor *(CLB19) | 0.04 | Orthogroups_2024-Update | |
Sobic.006G069100.3 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
Sobic.006G146400.4 | No alias | RNA editing factor *(MEF12) | 0.06 | Orthogroups_2024-Update | |
Sobic.007G208400.1 | No alias | RNA editing factor *(REME1) | 0.04 | Orthogroups_2024-Update | |
Sobic.008G009000.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
Sobic.008G041000.1 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
Sobic.008G066900.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
Sobic.008G179000.1 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
Sobic.009G136200.1 | No alias | RNA editing factor *(MEF32) | 0.03 | Orthogroups_2024-Update | |
Sobic.009G155400.3 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
Sobic.009G238700.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
Sobic.010G066900.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
Sobic.010G067000.1 | No alias | RNA editing factor *(MEF29) | 0.04 | Orthogroups_2024-Update | |
Sobic.010G181000.1 | No alias | Unknown function | 0.05 | Orthogroups_2024-Update | |
Sobic.010G190900.1 | No alias | Unknown function | 0.07 | Orthogroups_2024-Update | |
Sobic.010G232700.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
Solyc01g094850 | No alias | Pentatricopeptide repeat superfamily protein, putative... | 0.03 | Orthogroups_2024-Update | |
Solyc02g079380 | No alias | Pentatricopeptide repeat-containing protein (AHRD V3.3... | 0.03 | Orthogroups_2024-Update | |
Solyc03g051780 | No alias | Pectin lyase-like superfamily protein (AHRD V3.3 *** AT3G57790.2) | 0.03 | Orthogroups_2024-Update | |
Solyc11g005960 | No alias | Pentatricopeptide repeat-containing protein (AHRD V3.3... | 0.03 | Orthogroups_2024-Update | |
Solyc11g007230 | No alias | LOW QUALITY:Pentatricopeptide repeat-containing protein... | 0.03 | Orthogroups_2024-Update | |
Sopen01g038630 | No alias | PPR repeat | 0.03 | Orthogroups_2024-Update | |
Sopen01g038950 | No alias | PPR repeat | 0.03 | Orthogroups_2024-Update | |
Sopen01g041280 | No alias | PPR repeat family | 0.03 | Orthogroups_2024-Update | |
Sopen02g015160 | No alias | PPR repeat | 0.02 | Orthogroups_2024-Update | |
Sopen02g025050 | No alias | PPR repeat family | 0.04 | Orthogroups_2024-Update | |
Sopen02g033370 | No alias | PPR repeat family | 0.03 | Orthogroups_2024-Update | |
Sopen02g039140 | No alias | PPR repeat | 0.02 | Orthogroups_2024-Update | |
Sopen03g003770 | No alias | PPR repeat family | 0.03 | Orthogroups_2024-Update | |
Sopen03g028590 | No alias | PPR repeat family | 0.03 | Orthogroups_2024-Update | |
Sopen05g018650 | No alias | PPR repeat family | 0.05 | Orthogroups_2024-Update | |
Sopen07g003070 | No alias | PPR repeat | 0.03 | Orthogroups_2024-Update | |
Sopen07g022420 | No alias | PPR repeat family | 0.04 | Orthogroups_2024-Update | |
Sopen09g031050 | No alias | PPR repeat | 0.03 | Orthogroups_2024-Update | |
Sopen09g033130 | No alias | PPR repeat family | 0.04 | Orthogroups_2024-Update | |
Sopen10g004410 | No alias | PPR repeat family | 0.03 | Orthogroups_2024-Update | |
Sopen11g009180 | No alias | PPR repeat | 0.02 | Orthogroups_2024-Update | |
Sopen11g024970 | No alias | PPR repeat family | 0.04 | Orthogroups_2024-Update | |
Sopen11g029050 | No alias | PPR repeat family | 0.03 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000075 | cell cycle checkpoint | IEP | Predicted GO |
BP | GO:0000077 | DNA damage checkpoint | IEP | Predicted GO |
BP | GO:0000096 | sulfur amino acid metabolic process | IEP | Predicted GO |
BP | GO:0000098 | sulfur amino acid catabolic process | IEP | Predicted GO |
BP | GO:0000226 | microtubule cytoskeleton organization | IEP | Predicted GO |
BP | GO:0000469 | cleavage involved in rRNA processing | IEP | Predicted GO |
BP | GO:0000726 | non-recombinational repair | IEP | Predicted GO |
BP | GO:0002097 | tRNA wobble base modification | IEP | Predicted GO |
BP | GO:0002098 | tRNA wobble uridine modification | IEP | Predicted GO |
MF | GO:0003690 | double-stranded DNA binding | IEP | Predicted GO |
MF | GO:0003968 | RNA-directed 5'-3' RNA polymerase activity | IEP | Predicted GO |
MF | GO:0004576 | oligosaccharyl transferase activity | IEP | Predicted GO |
MF | GO:0004797 | thymidine kinase activity | IEP | Predicted GO |
MF | GO:0005085 | guanyl-nucleotide exchange factor activity | IEP | Predicted GO |
CC | GO:0005875 | microtubule associated complex | IEP | Predicted GO |
BP | GO:0006082 | organic acid metabolic process | IEP | Predicted GO |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Predicted GO |
BP | GO:0006259 | DNA metabolic process | IEP | Predicted GO |
BP | GO:0006281 | DNA repair | IEP | Predicted GO |
BP | GO:0006298 | mismatch repair | IEP | Predicted GO |
BP | GO:0006302 | double-strand break repair | IEP | Predicted GO |
BP | GO:0006303 | double-strand break repair via nonhomologous end joining | IEP | Predicted GO |
BP | GO:0006399 | tRNA metabolic process | IEP | Predicted GO |
BP | GO:0006400 | tRNA modification | IEP | Predicted GO |
BP | GO:0006520 | cellular amino acid metabolic process | IEP | Predicted GO |
BP | GO:0006575 | cellular modified amino acid metabolic process | IEP | Predicted GO |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Predicted GO |
BP | GO:0006778 | porphyrin-containing compound metabolic process | IEP | Predicted GO |
BP | GO:0006779 | porphyrin-containing compound biosynthetic process | IEP | Predicted GO |
BP | GO:0006783 | heme biosynthetic process | IEP | Predicted GO |
BP | GO:0006784 | heme a biosynthetic process | IEP | Predicted GO |
BP | GO:0006950 | response to stress | IEP | Predicted GO |
BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | Predicted GO |
BP | GO:0007010 | cytoskeleton organization | IEP | Predicted GO |
BP | GO:0007051 | spindle organization | IEP | Predicted GO |
MF | GO:0008270 | zinc ion binding | IEP | Predicted GO |
BP | GO:0009063 | cellular amino acid catabolic process | IEP | Predicted GO |
BP | GO:0009966 | regulation of signal transduction | IEP | Predicted GO |
BP | GO:0010646 | regulation of cell communication | IEP | Predicted GO |
BP | GO:0016054 | organic acid catabolic process | IEP | Predicted GO |
MF | GO:0016653 | oxidoreductase activity, acting on NAD(P)H, heme protein as acceptor | IEP | Predicted GO |
MF | GO:0016667 | oxidoreductase activity, acting on a sulfur group of donors | IEP | Predicted GO |
MF | GO:0016670 | oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor | IEP | Predicted GO |
MF | GO:0019136 | deoxynucleoside kinase activity | IEP | Predicted GO |
MF | GO:0019205 | nucleobase-containing compound kinase activity | IEP | Predicted GO |
MF | GO:0019206 | nucleoside kinase activity | IEP | Predicted GO |
BP | GO:0019752 | carboxylic acid metabolic process | IEP | Predicted GO |
MF | GO:0019899 | enzyme binding | IEP | Predicted GO |
BP | GO:0022402 | cell cycle process | IEP | Predicted GO |
BP | GO:0023051 | regulation of signaling | IEP | Predicted GO |
BP | GO:0030328 | prenylcysteine catabolic process | IEP | Predicted GO |
BP | GO:0030329 | prenylcysteine metabolic process | IEP | Predicted GO |
MF | GO:0030983 | mismatched DNA binding | IEP | Predicted GO |
BP | GO:0031570 | DNA integrity checkpoint | IEP | Predicted GO |
MF | GO:0031625 | ubiquitin protein ligase binding | IEP | Predicted GO |
BP | GO:0032012 | regulation of ARF protein signal transduction | IEP | Predicted GO |
BP | GO:0033014 | tetrapyrrole biosynthetic process | IEP | Predicted GO |
BP | GO:0033554 | cellular response to stress | IEP | Predicted GO |
CC | GO:0033588 | Elongator holoenzyme complex | IEP | Predicted GO |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Predicted GO |
BP | GO:0034660 | ncRNA metabolic process | IEP | Predicted GO |
BP | GO:0042168 | heme metabolic process | IEP | Predicted GO |
BP | GO:0042219 | cellular modified amino acid catabolic process | IEP | Predicted GO |
BP | GO:0042440 | pigment metabolic process | IEP | Predicted GO |
BP | GO:0043436 | oxoacid metabolic process | IEP | Predicted GO |
BP | GO:0044273 | sulfur compound catabolic process | IEP | Predicted GO |
MF | GO:0044389 | ubiquitin-like protein ligase binding | IEP | Predicted GO |
BP | GO:0045786 | negative regulation of cell cycle | IEP | Predicted GO |
BP | GO:0046148 | pigment biosynthetic process | IEP | Predicted GO |
BP | GO:0046160 | heme a metabolic process | IEP | Predicted GO |
BP | GO:0046395 | carboxylic acid catabolic process | IEP | Predicted GO |
BP | GO:0046483 | heterocycle metabolic process | IEP | Predicted GO |
BP | GO:0046578 | regulation of Ras protein signal transduction | IEP | Predicted GO |
BP | GO:0048583 | regulation of response to stimulus | IEP | Predicted GO |
BP | GO:0050896 | response to stimulus | IEP | Predicted GO |
BP | GO:0051056 | regulation of small GTPase mediated signal transduction | IEP | Predicted GO |
BP | GO:0051225 | spindle assembly | IEP | Predicted GO |
BP | GO:0051603 | proteolysis involved in cellular protein catabolic process | IEP | Predicted GO |
BP | GO:0051716 | cellular response to stimulus | IEP | Predicted GO |
MF | GO:0070403 | NAD+ binding | IEP | Predicted GO |
CC | GO:0070652 | HAUS complex | IEP | Predicted GO |
BP | GO:0070925 | organelle assembly | IEP | Predicted GO |
BP | GO:0090304 | nucleic acid metabolic process | IEP | Predicted GO |
BP | GO:0090305 | nucleic acid phosphodiester bond hydrolysis | IEP | Predicted GO |
BP | GO:0090501 | RNA phosphodiester bond hydrolysis | IEP | Predicted GO |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Predicted GO |
BP | GO:1902531 | regulation of intracellular signal transduction | IEP | Predicted GO |
No external refs found! |