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  5. Seita.7G211000.1

Seita.7G211000.1


Description : RAV/NGATHA-type transcription factor


Gene families : OG_42_0000305 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000305_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.7G211000.1
Cluster HCAA Clusters: Cluster_116

Target Alias Description ECC score Gene Family Method Actions
Brara.C02344.1 No alias RAV/NGATHA-type transcription factor 0.02 Orthogroups_2024-Update
Seita.9G562700.1 No alias RAV/NGATHA-type transcription factor 0.08 Orthogroups_2024-Update
Solyc08g083400 No alias B3 domain-containing protein (AHRD V3.3 *-* W9RW19_9ROSA) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0006812 cation transport IEP Predicted GO
MF GO:0008324 cation transmembrane transporter activity IEP Predicted GO
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Predicted GO
BP GO:0030001 metal ion transport IEP Predicted GO
MF GO:0042393 histone binding IEP Predicted GO
MF GO:0046873 metal ion transmembrane transporter activity IEP Predicted GO
InterPro domains Description Start Stop
IPR003340 B3_DNA-bd 100 204
No external refs found!