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  5. Seita.7G223500.1

Seita.7G223500.1


Description : GARP subgroup PHL transcription factor


Gene families : OG_42_0000021 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000021_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.7G223500.1
Cluster HCAA Clusters: Cluster_69

Target Alias Description ECC score Gene Family Method Actions
A4A49_11176 No alias putative myb family transcription factor 0.04 Orthogroups_2024-Update
A4A49_12162 No alias protein phosphate starvation response 1 0.04 Orthogroups_2024-Update
A4A49_36129 No alias protein phosphate starvation response 1 0.03 Orthogroups_2024-Update
A4A49_37728 No alias protein phosphate starvation response 1 0.02 Orthogroups_2024-Update
A4A49_41088 No alias myb family transcription factor phl5 0.02 Orthogroups_2024-Update
Bradi1g07511 No alias Homeodomain-like superfamily protein 0.01 Orthogroups_2024-Update
Bradi3g52500 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Bradi5g20520 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Brara.B02368.1 No alias regulatory protein *(FE) of florigen biosynthesis & GARP... 0.04 Orthogroups_2024-Update
Brara.I02613.1 No alias KANADI-type transcription factor 0.02 Orthogroups_2024-Update
Brara.I04980.1 No alias transcription factor *(CLAUSA) 0.02 Orthogroups_2024-Update
Brara.J01739.1 No alias GARP subgroup PHL transcription factor 0.02 Orthogroups_2024-Update
GRMZM2G701218 No alias myb-related protein 1 0.03 Orthogroups_2024-Update
Glyma.03G143600 No alias myb-like HTH transcriptional regulator family protein 0.04 Orthogroups_2024-Update
Glyma.05G158900 No alias myb-like HTH transcriptional regulator family protein 0.03 Orthogroups_2024-Update
Glyma.06G035700 No alias Homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
Glyma.12G089100 No alias Homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
Glyma.19G146600 No alias myb-like HTH transcriptional regulator family protein 0.01 Orthogroups_2024-Update
HORVU1Hr1G068930.39 No alias GARP subgroup PHL transcription factor 0.04 Orthogroups_2024-Update
HORVU2Hr1G045770.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU4Hr1G051080.3 No alias GARP subgroup PHL transcription factor & transcription... 0.03 Orthogroups_2024-Update
HORVU7Hr1G070420.7 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU7Hr1G107670.1 No alias transcription factor *(CLAUSA) 0.03 Orthogroups_2024-Update
LOC_Os02g47190 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
MA_21538g0020 No alias (at3g04030 : 219.0) Homeodomain-like superfamily... 0.03 Orthogroups_2024-Update
Potri.001G133400 No alias Homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
Potri.005G205900 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Potri.011G006350 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Potri.015G031600 No alias Homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
Potri.017G054800 No alias Homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
Pp1s112_141V6 No alias transfactor-like protein 0.02 Orthogroups_2024-Update
Pp1s201_75V6 No alias at3g24120 muj8_3 0.01 Orthogroups_2024-Update
Pp1s33_139V6 No alias myb family transcription factor 0.04 Orthogroups_2024-Update
Pp1s490_9V6 No alias myb-cc type transfactor 0.02 Orthogroups_2024-Update
Pp1s68_248V6 No alias myb transcription factor 0.02 Orthogroups_2024-Update
Pp1s73_118V6 No alias No description available 0.02 Orthogroups_2024-Update
Pp1s9_234V6 No alias rolled leaf 9 0.02 Orthogroups_2024-Update
Seita.1G286400.1 No alias GARP subgroup PHL transcription factor 0.02 Orthogroups_2024-Update
Sobic.002G121600.1 No alias GARP subgroup PHL transcription factor & transcription... 0.03 Orthogroups_2024-Update
Sobic.002G422000.1 No alias GARP subgroup PHL transcription factor 0.05 Orthogroups_2024-Update
Sobic.006G202300.2 No alias GARP subgroup PHL transcription factor 0.05 Orthogroups_2024-Update
Sobic.010G224200.1 No alias transcription factor *(CLAUSA) 0.02 Orthogroups_2024-Update
Solyc05g055940 No alias Myb-like transcription factor family protein (AHRD V3.3... 0.03 Orthogroups_2024-Update
Solyc10g083340 No alias Myb family transcription factor APL (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Solyc12g006280 No alias Homeodomain-like superfamily protein (AHRD V3.3 *-* AT2G40260.1) 0.05 Orthogroups_2024-Update
Sopen05g034340 No alias MYB-CC type transfactor, LHEQLE motif 0.03 Orthogroups_2024-Update
Sopen08g024980 No alias Myb-like DNA-binding domain 0.02 Orthogroups_2024-Update
Sopen10g035030 No alias MYB-CC type transfactor, LHEQLE motif 0.02 Orthogroups_2024-Update
Sopen12g002230 No alias Myb-like DNA-binding domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004602 glutathione peroxidase activity IEP Predicted GO
MF GO:0004743 pyruvate kinase activity IEP Predicted GO
MF GO:0004864 protein phosphatase inhibitor activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
BP GO:0006720 isoprenoid metabolic process IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
BP GO:0007165 signal transduction IEP Predicted GO
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP Predicted GO
BP GO:0008299 isoprenoid biosynthetic process IEP Predicted GO
BP GO:0008610 lipid biosynthetic process IEP Predicted GO
BP GO:0009690 cytokinin metabolic process IEP Predicted GO
BP GO:0009966 regulation of signal transduction IEP Predicted GO
BP GO:0010646 regulation of cell communication IEP Predicted GO
BP GO:0010817 regulation of hormone levels IEP Predicted GO
BP GO:0010921 regulation of phosphatase activity IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Predicted GO
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Predicted GO
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Predicted GO
MF GO:0019139 cytokinin dehydrogenase activity IEP Predicted GO
MF GO:0019208 phosphatase regulator activity IEP Predicted GO
MF GO:0019212 phosphatase inhibitor activity IEP Predicted GO
BP GO:0019220 regulation of phosphate metabolic process IEP Predicted GO
MF GO:0019888 protein phosphatase regulator activity IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
BP GO:0023051 regulation of signaling IEP Predicted GO
MF GO:0030955 potassium ion binding IEP Predicted GO
BP GO:0031399 regulation of protein modification process IEP Predicted GO
MF GO:0031420 alkali metal ion binding IEP Predicted GO
MF GO:0033743 peptide-methionine (R)-S-oxide reductase activity IEP Predicted GO
BP GO:0034754 cellular hormone metabolic process IEP Predicted GO
BP GO:0035303 regulation of dephosphorylation IEP Predicted GO
BP GO:0035304 regulation of protein dephosphorylation IEP Predicted GO
BP GO:0042445 hormone metabolic process IEP Predicted GO
BP GO:0043666 regulation of phosphoprotein phosphatase activity IEP Predicted GO
BP GO:0044255 cellular lipid metabolic process IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0050660 flavin adenine dinucleotide binding IEP Predicted GO
MF GO:0050661 NADP binding IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
BP GO:0051174 regulation of phosphorus metabolic process IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
BP GO:0051336 regulation of hydrolase activity IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
MF GO:0070402 NADPH binding IEP Predicted GO
MF GO:2001070 starch binding IEP Predicted GO
InterPro domains Description Start Stop
IPR025756 Myb_CC_LHEQLE 117 163
IPR001005 SANT/Myb 22 72
No external refs found!