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  5. Seita.7G227100.1

Seita.7G227100.1


Description : villin actin-crosslinking factor


Gene families : OG_42_0000618 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000618_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.7G227100.1
Cluster HCAA Clusters: Cluster_126

Target Alias Description ECC score Gene Family Method Actions
177604 No alias villin 2 0.02 Orthogroups_2024-Update
Brara.E01324.1 No alias villin actin-crosslinking factor 0.02 Orthogroups_2024-Update
Seita.4G190500.1 No alias villin actin-crosslinking factor 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEA 16Dec
BP GO:0007010 cytoskeleton organization IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0001882 nucleoside binding IEP Predicted GO
MF GO:0001883 purine nucleoside binding IEP Predicted GO
MF GO:0003924 GTPase activity IEP Predicted GO
MF GO:0005525 GTP binding IEP Predicted GO
MF GO:0019001 guanyl nucleotide binding IEP Predicted GO
MF GO:0032549 ribonucleoside binding IEP Predicted GO
MF GO:0032550 purine ribonucleoside binding IEP Predicted GO
MF GO:0032561 guanyl ribonucleotide binding IEP Predicted GO
InterPro domains Description Start Stop
IPR003128 Villin_headpiece 956 991
IPR007123 Gelsolin-like_dom 74 155
IPR007123 Gelsolin-like_dom 455 528
IPR007123 Gelsolin-like_dom 195 262
IPR007123 Gelsolin-like_dom 683 758
IPR007123 Gelsolin-like_dom 317 382
No external refs found!