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  5. Seita.7G243500.1

Seita.7G243500.1


Description : autophagosome ubiquitin-fold protein *(ATG8)


Gene families : OG_42_0000932 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000932_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.7G243500.1
Cluster HCAA Clusters: Cluster_151

Target Alias Description ECC score Gene Family Method Actions
Brara.C04506.1 No alias autophagosome ubiquitin-fold protein *(ATG8) 0.02 Orthogroups_2024-Update
Kfl00324_0190 kfl00324_0190_v1.... (at4g16520 : 214.0) autophagy 8f (ATG8F); CONTAINS... 0.02 Orthogroups_2024-Update
Sobic.006G220900.1 No alias autophagosome ubiquitin-fold protein *(ATG8) 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Predicted GO
CC GO:0000776 kinetochore IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
BP GO:0030258 lipid modification IEP Predicted GO
BP GO:0030259 lipid glycosylation IEP Predicted GO
BP GO:0034508 centromere complex assembly IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
CC GO:0044427 chromosomal part IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
BP GO:0065004 protein-DNA complex assembly IEP Predicted GO
BP GO:0070085 glycosylation IEP Predicted GO
BP GO:0071824 protein-DNA complex subunit organization IEP Predicted GO
InterPro domains Description Start Stop
IPR004241 Atg8-like 16 119
No external refs found!