Seita.7G247200.1

Description : organelle RNA splicing factor *(APO)

Gene families : OG_42_0001137 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001137_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria italica: Seita.7G247200.1
Cluster	HCAA Clusters: Cluster_219

Target	Alias	Description	ECC score	Gene Family Method
A4A49_36605	No alias	apo protein 2, chloroplastic	0.02	Orthogroups_2024-Update
Bradi3g45970	No alias	Arabidopsis thaliana protein of unknown function (DUF794)	0.05	Orthogroups_2024-Update
Solyc07g005570	No alias	APO protein 2 (AHRD V3.3 *** W9S368_9ROSA)	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	16Dec
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0008168	methyltransferase activity	IEP	Predicted GO
MF	GO:0016741	transferase activity, transferring one-carbon groups	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR023342	APO_dom	197	314
IPR023342	APO_dom	28	170

External Links

No external refs found!