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  5. Seita.7G248200.1

Seita.7G248200.1


Description : clade F phosphatase


Gene families : OG_42_0000194 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000194_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Setaria italica: Seita.7G248200.1
Cluster HCAA Clusters: Cluster_254

Target Alias Description ECC score Gene Family Method Actions
Bradi2g14740 No alias Protein phosphatase 2C family protein 0.03 Orthogroups_2024-Update
GRMZM2G010298 No alias Protein phosphatase 2C family protein 0.05 Orthogroups_2024-Update
GRMZM2G412937 No alias Protein phosphatase 2C family protein 0.03 Orthogroups_2024-Update
HORVU2Hr1G079240.1 No alias clade F phosphatase 0.03 Orthogroups_2024-Update
Potri.001G398100 No alias Protein phosphatase 2C family protein 0.02 Orthogroups_2024-Update
Pp1s174_123V6 No alias protein phosphatase 2c 0.03 Orthogroups_2024-Update
Pp1s225_37V6 No alias protein phosphatase 2c 0.04 Orthogroups_2024-Update
Sobic.007G078000.4 No alias clade F phosphatase 0.03 Orthogroups_2024-Update
Sobic.009G250900.1 No alias clade F phosphatase 0.02 Orthogroups_2024-Update
Solyc07g053760 No alias Protein phosphatase 2C family protein (AHRD V3.3 *** AT4G28400.1) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000387 spliceosomal snRNP assembly IEP Predicted GO
MF GO:0001871 pattern binding IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
MF GO:0005509 calcium ion binding IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
MF GO:0005546 phosphatidylinositol-4,5-bisphosphate binding IEP Predicted GO
CC GO:0005783 endoplasmic reticulum IEP Predicted GO
BP GO:0006417 regulation of translation IEP Predicted GO
BP GO:0006448 regulation of translational elongation IEP Predicted GO
BP GO:0006457 protein folding IEP Predicted GO
BP GO:0006606 protein import into nucleus IEP Predicted GO
BP GO:0006913 nucleocytoplasmic transport IEP Predicted GO
BP GO:0007062 sister chromatid cohesion IEP Predicted GO
BP GO:0007064 mitotic sister chromatid cohesion IEP Predicted GO
BP GO:0010608 posttranscriptional regulation of gene expression IEP Predicted GO
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Predicted GO
BP GO:0017038 protein import IEP Predicted GO
BP GO:0017182 peptidyl-diphthamide metabolic process IEP Predicted GO
BP GO:0017183 peptidyl-diphthamide biosynthetic process from peptidyl-histidine IEP Predicted GO
BP GO:0018202 peptidyl-histidine modification IEP Predicted GO
BP GO:0022402 cell cycle process IEP Predicted GO
BP GO:0022618 ribonucleoprotein complex assembly IEP Predicted GO
MF GO:0030246 carbohydrate binding IEP Predicted GO
MF GO:0030247 polysaccharide binding IEP Predicted GO
BP GO:0032268 regulation of cellular protein metabolic process IEP Predicted GO
BP GO:0033365 protein localization to organelle IEP Predicted GO
BP GO:0034248 regulation of cellular amide metabolic process IEP Predicted GO
BP GO:0034504 protein localization to nucleus IEP Predicted GO
BP GO:0034613 cellular protein localization IEP Predicted GO
MF GO:0051082 unfolded protein binding IEP Predicted GO
BP GO:0051169 nuclear transport IEP Predicted GO
BP GO:0051170 import into nucleus IEP Predicted GO
BP GO:0051246 regulation of protein metabolic process IEP Predicted GO
MF GO:0061608 nuclear import signal receptor activity IEP Predicted GO
BP GO:0070727 cellular macromolecule localization IEP Predicted GO
BP GO:0071826 ribonucleoprotein complex subunit organization IEP Predicted GO
BP GO:0072594 establishment of protein localization to organelle IEP Predicted GO
MF GO:0090560 2-(3-amino-3-carboxypropyl)histidine synthase activity IEP Predicted GO
MF GO:0140104 molecular carrier activity IEP Predicted GO
MF GO:0140142 nucleocytoplasmic carrier activity IEP Predicted GO
BP GO:1900247 regulation of cytoplasmic translational elongation IEP Predicted GO
MF GO:1901981 phosphatidylinositol phosphate binding IEP Predicted GO
MF GO:1902936 phosphatidylinositol bisphosphate binding IEP Predicted GO
BP GO:1903047 mitotic cell cycle process IEP Predicted GO
BP GO:2000765 regulation of cytoplasmic translation IEP Predicted GO
InterPro domains Description Start Stop
IPR001932 PPM-type_phosphatase_dom 47 275
No external refs found!